Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Trim33Q99PP7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Trim33Q99PP7 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Trim33Q99PP7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Trim33Q99PP7 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.88■■□□□ 1.57
Trim33Q99PP7 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Trim33Q99PP7 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Trim33Q99PP7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
Trim33Q99PP7 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Trim33Q99PP7 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Trim33Q99PP7 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Trim33Q99PP7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
Trim33Q99PP7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Trim33Q99PP7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Trim33Q99PP7 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC24.81■■□□□ 1.56
Trim33Q99PP7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.79■■□□□ 1.56
Trim33Q99PP7 Zfp131-205ENSMUST00000223812 663 ntBASIC24.77■■□□□ 1.56
Trim33Q99PP7 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trim33Q99PP7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
Trim33Q99PP7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC24.74■■□□□ 1.55
Trim33Q99PP7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim33Q99PP7 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Trim33Q99PP7 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Trim33Q99PP7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Trim33Q99PP7 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Trim33Q99PP7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Trim33Q99PP7 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Trim33Q99PP7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC24.71■■□□□ 1.55
Trim33Q99PP7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Trim33Q99PP7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Trim33Q99PP7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC24.7■■□□□ 1.54
Trim33Q99PP7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Trim33Q99PP7 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Trim33Q99PP7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Trim33Q99PP7 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim33Q99PP7 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.66■■□□□ 1.54
Trim33Q99PP7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Trim33Q99PP7 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Trim33Q99PP7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Trim33Q99PP7 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
Trim33Q99PP7 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Trim33Q99PP7 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.63■■□□□ 1.53
Trim33Q99PP7 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Trim33Q99PP7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC24.62■■□□□ 1.53
Trim33Q99PP7 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Trim33Q99PP7 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim33Q99PP7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC24.6■■□□□ 1.53
Trim33Q99PP7 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Trim33Q99PP7 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim33Q99PP7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Trim33Q99PP7 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
Trim33Q99PP7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim33Q99PP7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.56■■□□□ 1.52
Trim33Q99PP7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Trim33Q99PP7 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Trim33Q99PP7 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Trim33Q99PP7 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Trim33Q99PP7 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Trim33Q99PP7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC24.53■■□□□ 1.52
Trim33Q99PP7 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Trim33Q99PP7 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Trim33Q99PP7 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim33Q99PP7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim33Q99PP7 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Trim33Q99PP7 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Trim33Q99PP7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
Trim33Q99PP7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
Trim33Q99PP7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim33Q99PP7 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Trim33Q99PP7 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Trim33Q99PP7 Tdp2-203ENSMUST00000223804 1136 ntBASIC24.46■■□□□ 1.51
Trim33Q99PP7 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Trim33Q99PP7 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Trim33Q99PP7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Trim33Q99PP7 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim33Q99PP7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Trim33Q99PP7 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Trim33Q99PP7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.44■■□□□ 1.5
Trim33Q99PP7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim33Q99PP7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Trim33Q99PP7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.43■■□□□ 1.5
Trim33Q99PP7 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Trim33Q99PP7 Gm6345-201ENSMUST00000180378 1691 ntBASIC24.43■■□□□ 1.5
Trim33Q99PP7 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Trim33Q99PP7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Trim33Q99PP7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Trim33Q99PP7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Trim33Q99PP7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Trim33Q99PP7 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Trim33Q99PP7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Trim33Q99PP7 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Trim33Q99PP7 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Trim33Q99PP7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Trim33Q99PP7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC24.35■■□□□ 1.49
Trim33Q99PP7 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms