Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Rtn4Q99P72 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Rtn4Q99P72 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.86■■■□□ 2.69
Rtn4Q99P72 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Rtn4Q99P72 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC31.85■■■□□ 2.69
Rtn4Q99P72 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Rtn4Q99P72 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Rtn4Q99P72 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Rtn4Q99P72 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Rtn4Q99P72 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
Rtn4Q99P72 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Rtn4Q99P72 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rtn4Q99P72 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rtn4Q99P72 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.78■■■□□ 2.68
Rtn4Q99P72 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC31.77■■■□□ 2.68
Rtn4Q99P72 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC31.76■■■□□ 2.68
Rtn4Q99P72 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC31.75■■■□□ 2.67
Rtn4Q99P72 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
Rtn4Q99P72 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rtn4Q99P72 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rtn4Q99P72 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rtn4Q99P72 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Rtn4Q99P72 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC31.69■■■□□ 2.66
Rtn4Q99P72 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Rtn4Q99P72 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Rtn4Q99P72 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
Rtn4Q99P72 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC31.66■■■□□ 2.66
Rtn4Q99P72 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
Rtn4Q99P72 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Rtn4Q99P72 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rtn4Q99P72 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC31.63■■■□□ 2.65
Rtn4Q99P72 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Rtn4Q99P72 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtn4Q99P72 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rtn4Q99P72 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Rtn4Q99P72 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC31.59■■■□□ 2.65
Rtn4Q99P72 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Rtn4Q99P72 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC31.58■■■□□ 2.65
Rtn4Q99P72 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rtn4Q99P72 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Rtn4Q99P72 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rtn4Q99P72 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rtn4Q99P72 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rtn4Q99P72 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rtn4Q99P72 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.54■■■□□ 2.64
Rtn4Q99P72 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
Rtn4Q99P72 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Rtn4Q99P72 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
Rtn4Q99P72 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Rtn4Q99P72 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Rtn4Q99P72 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC31.52■■■□□ 2.64
Rtn4Q99P72 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Rtn4Q99P72 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
Rtn4Q99P72 Gm2415-204ENSMUST00000190235 2004 ntBASIC31.49■■■□□ 2.63
Rtn4Q99P72 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.49■■■□□ 2.63
Rtn4Q99P72 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rtn4Q99P72 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rtn4Q99P72 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rtn4Q99P72 Gm24970-201ENSMUST00000175582 82 ntBASIC31.47■■■□□ 2.63
Rtn4Q99P72 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Rtn4Q99P72 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rtn4Q99P72 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
Rtn4Q99P72 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Rtn4Q99P72 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Rtn4Q99P72 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
Rtn4Q99P72 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC31.39■■■□□ 2.62
Rtn4Q99P72 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Rtn4Q99P72 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC31.34■■■□□ 2.61
Rtn4Q99P72 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC31.34■■■□□ 2.61
Rtn4Q99P72 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC31.33■■■□□ 2.61
Rtn4Q99P72 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.33■■■□□ 2.61
Rtn4Q99P72 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
Rtn4Q99P72 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Rtn4Q99P72 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rtn4Q99P72 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rtn4Q99P72 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Rtn4Q99P72 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Rtn4Q99P72 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rtn4Q99P72 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Rtn4Q99P72 Gm6658-202ENSMUST00000209493 1885 ntBASIC31.27■■■□□ 2.6
Rtn4Q99P72 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.26■■■□□ 2.6
Rtn4Q99P72 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Rtn4Q99P72 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
Rtn4Q99P72 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Rtn4Q99P72 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Rtn4Q99P72 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
Rtn4Q99P72 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Rtn4Q99P72 Gm9939-201ENSMUST00000067161 1154 ntBASIC31.18■■■□□ 2.58
Rtn4Q99P72 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
Rtn4Q99P72 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rtn4Q99P72 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rtn4Q99P72 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
Rtn4Q99P72 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC31.13■■■□□ 2.57
Rtn4Q99P72 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rtn4Q99P72 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
Rtn4Q99P72 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC31.11■■■□□ 2.57
Rtn4Q99P72 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtn4Q99P72 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtn4Q99P72 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtn4Q99P72 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.09■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms