Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.74■■■□□ 2.51
Pcdhb5Q91XZ5 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.74■■■□□ 2.51
Pcdhb5Q91XZ5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Pcdhb5Q91XZ5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.73■■■□□ 2.51
Pcdhb5Q91XZ5 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Pcdhb5Q91XZ5 Gm24970-201ENSMUST00000175582 82 ntBASIC30.7■■■□□ 2.51
Pcdhb5Q91XZ5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
Pcdhb5Q91XZ5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.69■■■□□ 2.5
Pcdhb5Q91XZ5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
Pcdhb5Q91XZ5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Pcdhb5Q91XZ5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Pcdhb5Q91XZ5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Pcdhb5Q91XZ5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Pcdhb5Q91XZ5 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Pcdhb5Q91XZ5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.63■■■□□ 2.49
Pcdhb5Q91XZ5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Pcdhb5Q91XZ5 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Pcdhb5Q91XZ5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Pcdhb5Q91XZ5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Pcdhb5Q91XZ5 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Pcdhb5Q91XZ5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Pcdhb5Q91XZ5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Pcdhb5Q91XZ5 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.54■■■□□ 2.48
Pcdhb5Q91XZ5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Pcdhb5Q91XZ5 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Pcdhb5Q91XZ5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pcdhb5Q91XZ5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Pcdhb5Q91XZ5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.48■■■□□ 2.47
Pcdhb5Q91XZ5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
Pcdhb5Q91XZ5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pcdhb5Q91XZ5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.47■■■□□ 2.47
Pcdhb5Q91XZ5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Pcdhb5Q91XZ5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.46■■■□□ 2.47
Pcdhb5Q91XZ5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Pcdhb5Q91XZ5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
Pcdhb5Q91XZ5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Pcdhb5Q91XZ5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Pcdhb5Q91XZ5 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Pcdhb5Q91XZ5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Pcdhb5Q91XZ5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.4■■■□□ 2.46
Pcdhb5Q91XZ5 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.4■■■□□ 2.46
Pcdhb5Q91XZ5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pcdhb5Q91XZ5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
Pcdhb5Q91XZ5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Pcdhb5Q91XZ5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
Pcdhb5Q91XZ5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.38■■■□□ 2.45
Pcdhb5Q91XZ5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Pcdhb5Q91XZ5 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
Pcdhb5Q91XZ5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
Pcdhb5Q91XZ5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
Pcdhb5Q91XZ5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
Pcdhb5Q91XZ5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
Pcdhb5Q91XZ5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Pcdhb5Q91XZ5 Gm2415-204ENSMUST00000190235 2004 ntBASIC30.25■■■□□ 2.43
Pcdhb5Q91XZ5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pcdhb5Q91XZ5 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
Pcdhb5Q91XZ5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.25■■■□□ 2.43
Pcdhb5Q91XZ5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Pcdhb5Q91XZ5 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.24■■■□□ 2.43
Pcdhb5Q91XZ5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Pcdhb5Q91XZ5 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcdhb5Q91XZ5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Pcdhb5Q91XZ5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Pcdhb5Q91XZ5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
Pcdhb5Q91XZ5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Pcdhb5Q91XZ5 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC30.2■■■□□ 2.43
Pcdhb5Q91XZ5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.2■■■□□ 2.43
Pcdhb5Q91XZ5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Pcdhb5Q91XZ5 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
Pcdhb5Q91XZ5 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Pcdhb5Q91XZ5 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.17■■■□□ 2.42
Pcdhb5Q91XZ5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Pcdhb5Q91XZ5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Pcdhb5Q91XZ5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
Pcdhb5Q91XZ5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Pcdhb5Q91XZ5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Pcdhb5Q91XZ5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
Pcdhb5Q91XZ5 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Pcdhb5Q91XZ5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC30.11■■■□□ 2.41
Pcdhb5Q91XZ5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Pcdhb5Q91XZ5 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Pcdhb5Q91XZ5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Pcdhb5Q91XZ5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Pcdhb5Q91XZ5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pcdhb5Q91XZ5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
Pcdhb5Q91XZ5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Pcdhb5Q91XZ5 Gm8503-201ENSMUST00000118131 455 ntBASIC30.07■■■□□ 2.4
Pcdhb5Q91XZ5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Pcdhb5Q91XZ5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.06■■■□□ 2.4
Pcdhb5Q91XZ5 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.06■■■□□ 2.4
Pcdhb5Q91XZ5 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.04■■■□□ 2.4
Pcdhb5Q91XZ5 Gm6821-201ENSMUST00000107540 542 ntBASIC30.03■■■□□ 2.4
Pcdhb5Q91XZ5 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.02■■■□□ 2.4
Pcdhb5Q91XZ5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
Pcdhb5Q91XZ5 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30■■■□□ 2.39
Pcdhb5Q91XZ5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Pcdhb5Q91XZ5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30■■■□□ 2.39
Pcdhb5Q91XZ5 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC30■■■□□ 2.39
Pcdhb5Q91XZ5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Pcdhb5Q91XZ5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.98■■■□□ 2.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms