Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.11■■□□□ 1.77
Trim60Q8VI40 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trim60Q8VI40 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
Trim60Q8VI40 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC26.11■■□□□ 1.77
Trim60Q8VI40 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.09■■□□□ 1.77
Trim60Q8VI40 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trim60Q8VI40 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Trim60Q8VI40 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.06■■□□□ 1.76
Trim60Q8VI40 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trim60Q8VI40 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Trim60Q8VI40 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Trim60Q8VI40 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim60Q8VI40 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Trim60Q8VI40 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Trim60Q8VI40 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trim60Q8VI40 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Trim60Q8VI40 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
Trim60Q8VI40 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Trim60Q8VI40 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Trim60Q8VI40 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Trim60Q8VI40 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Trim60Q8VI40 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Trim60Q8VI40 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Trim60Q8VI40 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trim60Q8VI40 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim60Q8VI40 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Trim60Q8VI40 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim60Q8VI40 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Trim60Q8VI40 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Trim60Q8VI40 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim60Q8VI40 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim60Q8VI40 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trim60Q8VI40 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC25.9■■□□□ 1.74
Trim60Q8VI40 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.9■■□□□ 1.74
Trim60Q8VI40 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Trim60Q8VI40 Gm26115-201ENSMUST00000175605 87 ntBASIC25.89■■□□□ 1.74
Trim60Q8VI40 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
Trim60Q8VI40 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Trim60Q8VI40 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Trim60Q8VI40 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.88■■□□□ 1.73
Trim60Q8VI40 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Trim60Q8VI40 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Trim60Q8VI40 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Trim60Q8VI40 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
Trim60Q8VI40 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Trim60Q8VI40 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trim60Q8VI40 Peli2-204ENSMUST00000226513 1320 ntBASIC25.85■■□□□ 1.73
Trim60Q8VI40 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trim60Q8VI40 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.84■■□□□ 1.73
Trim60Q8VI40 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Trim60Q8VI40 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Trim60Q8VI40 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trim60Q8VI40 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Trim60Q8VI40 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Trim60Q8VI40 Gm8109-201ENSMUST00000194076 746 ntBASIC25.81■■□□□ 1.72
Trim60Q8VI40 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trim60Q8VI40 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim60Q8VI40 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Trim60Q8VI40 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim60Q8VI40 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim60Q8VI40 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Trim60Q8VI40 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Trim60Q8VI40 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Trim60Q8VI40 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25.74■■□□□ 1.71
Trim60Q8VI40 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trim60Q8VI40 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.74■■□□□ 1.71
Trim60Q8VI40 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.74■■□□□ 1.71
Trim60Q8VI40 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
Trim60Q8VI40 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Trim60Q8VI40 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
Trim60Q8VI40 Amer2-203ENSMUST00000225247 2662 ntBASIC25.72■■□□□ 1.71
Trim60Q8VI40 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trim60Q8VI40 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Trim60Q8VI40 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Trim60Q8VI40 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25.7■■□□□ 1.7
Trim60Q8VI40 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Trim60Q8VI40 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
Trim60Q8VI40 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Trim60Q8VI40 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim60Q8VI40 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.69■■□□□ 1.7
Trim60Q8VI40 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim60Q8VI40 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.68■■□□□ 1.7
Trim60Q8VI40 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Trim60Q8VI40 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim60Q8VI40 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Trim60Q8VI40 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim60Q8VI40 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim60Q8VI40 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim60Q8VI40 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim60Q8VI40 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trim60Q8VI40 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trim60Q8VI40 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim60Q8VI40 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim60Q8VI40 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim60Q8VI40 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Trim60Q8VI40 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim60Q8VI40 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.59■■□□□ 1.69
Trim60Q8VI40 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Trim60Q8VI40 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Trim60Q8VI40 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms