Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
Cdhr1Q8VHP6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Cdhr1Q8VHP6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Cdhr1Q8VHP6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC25.02■■□□□ 1.6
Cdhr1Q8VHP6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cdhr1Q8VHP6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Cdhr1Q8VHP6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
Cdhr1Q8VHP6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Cdhr1Q8VHP6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cdhr1Q8VHP6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC24.98■■□□□ 1.59
Cdhr1Q8VHP6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Cdhr1Q8VHP6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Cdhr1Q8VHP6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC24.97■■□□□ 1.59
Cdhr1Q8VHP6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Cdhr1Q8VHP6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cdhr1Q8VHP6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC24.96■■□□□ 1.59
Cdhr1Q8VHP6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Cdhr1Q8VHP6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cdhr1Q8VHP6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cdhr1Q8VHP6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Cdhr1Q8VHP6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Cdhr1Q8VHP6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cdhr1Q8VHP6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Cdhr1Q8VHP6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Cdhr1Q8VHP6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC24.92■■□□□ 1.58
Cdhr1Q8VHP6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Cdhr1Q8VHP6 Gm24970-201ENSMUST00000175582 82 ntBASIC24.9■■□□□ 1.58
Cdhr1Q8VHP6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cdhr1Q8VHP6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Cdhr1Q8VHP6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Cdhr1Q8VHP6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC24.89■■□□□ 1.57
Cdhr1Q8VHP6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Cdhr1Q8VHP6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.88■■□□□ 1.57
Cdhr1Q8VHP6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
Cdhr1Q8VHP6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC24.88■■□□□ 1.57
Cdhr1Q8VHP6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Cdhr1Q8VHP6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
Cdhr1Q8VHP6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Cdhr1Q8VHP6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Cdhr1Q8VHP6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Cdhr1Q8VHP6 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.84■■□□□ 1.57
Cdhr1Q8VHP6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Cdhr1Q8VHP6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Cdhr1Q8VHP6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
Cdhr1Q8VHP6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Cdhr1Q8VHP6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Cdhr1Q8VHP6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC24.79■■□□□ 1.56
Cdhr1Q8VHP6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Cdhr1Q8VHP6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cdhr1Q8VHP6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Cdhr1Q8VHP6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Cdhr1Q8VHP6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.74■■□□□ 1.55
Cdhr1Q8VHP6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Cdhr1Q8VHP6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Cdhr1Q8VHP6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Cdhr1Q8VHP6 Gm43863-201ENSMUST00000203822 1192 ntBASIC24.72■■□□□ 1.55
Cdhr1Q8VHP6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
Cdhr1Q8VHP6 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Cdhr1Q8VHP6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cdhr1Q8VHP6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Cdhr1Q8VHP6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Cdhr1Q8VHP6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Cdhr1Q8VHP6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Cdhr1Q8VHP6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Cdhr1Q8VHP6 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.66■■□□□ 1.54
Cdhr1Q8VHP6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Cdhr1Q8VHP6 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Cdhr1Q8VHP6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Cdhr1Q8VHP6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.64■■□□□ 1.54
Cdhr1Q8VHP6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
Cdhr1Q8VHP6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
Cdhr1Q8VHP6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Cdhr1Q8VHP6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC24.61■■□□□ 1.53
Cdhr1Q8VHP6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cdhr1Q8VHP6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Cdhr1Q8VHP6 Gm30346-201ENSMUST00000218641 1699 ntBASIC24.57■■□□□ 1.52
Cdhr1Q8VHP6 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.56■■□□□ 1.52
Cdhr1Q8VHP6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Cdhr1Q8VHP6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
Cdhr1Q8VHP6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC24.55■■□□□ 1.52
Cdhr1Q8VHP6 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Cdhr1Q8VHP6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cdhr1Q8VHP6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Cdhr1Q8VHP6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Cdhr1Q8VHP6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Cdhr1Q8VHP6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Cdhr1Q8VHP6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Cdhr1Q8VHP6 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.5■■□□□ 1.51
Cdhr1Q8VHP6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Cdhr1Q8VHP6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Cdhr1Q8VHP6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Cdhr1Q8VHP6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Cdhr1Q8VHP6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Cdhr1Q8VHP6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cdhr1Q8VHP6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC24.46■■□□□ 1.51
Cdhr1Q8VHP6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Cdhr1Q8VHP6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Cdhr1Q8VHP6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Cdhr1Q8VHP6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Cdhr1Q8VHP6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC24.44■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms