Protein–RNA interactions for Protein: Q8VHF2

Cdhr5, Cadherin-related family member 5, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr5Q8VHF2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC23.59■■□□□ 1.37
Cdhr5Q8VHF2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.59■■□□□ 1.37
Cdhr5Q8VHF2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Cdhr5Q8VHF2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
Cdhr5Q8VHF2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Cdhr5Q8VHF2 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Cdhr5Q8VHF2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Cdhr5Q8VHF2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Cdhr5Q8VHF2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Cdhr5Q8VHF2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
Cdhr5Q8VHF2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
Cdhr5Q8VHF2 Gm27322-201ENSMUST00000184007 104 ntBASIC23.55■■□□□ 1.36
Cdhr5Q8VHF2 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Cdhr5Q8VHF2 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.54■■□□□ 1.36
Cdhr5Q8VHF2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Cdhr5Q8VHF2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Cdhr5Q8VHF2 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cdhr5Q8VHF2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cdhr5Q8VHF2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Cdhr5Q8VHF2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Cdhr5Q8VHF2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
Cdhr5Q8VHF2 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr5Q8VHF2 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr5Q8VHF2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Cdhr5Q8VHF2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Cdhr5Q8VHF2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cdhr5Q8VHF2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Cdhr5Q8VHF2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.46■■□□□ 1.35
Cdhr5Q8VHF2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Cdhr5Q8VHF2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Cdhr5Q8VHF2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Cdhr5Q8VHF2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC23.44■■□□□ 1.34
Cdhr5Q8VHF2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Cdhr5Q8VHF2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Cdhr5Q8VHF2 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cdhr5Q8VHF2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Cdhr5Q8VHF2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cdhr5Q8VHF2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Cdhr5Q8VHF2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.39■■□□□ 1.34
Cdhr5Q8VHF2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cdhr5Q8VHF2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Cdhr5Q8VHF2 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Cdhr5Q8VHF2 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Cdhr5Q8VHF2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cdhr5Q8VHF2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Cdhr5Q8VHF2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Cdhr5Q8VHF2 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Cdhr5Q8VHF2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.32■■□□□ 1.32
Cdhr5Q8VHF2 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.31■■□□□ 1.32
Cdhr5Q8VHF2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cdhr5Q8VHF2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Cdhr5Q8VHF2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Cdhr5Q8VHF2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Cdhr5Q8VHF2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cdhr5Q8VHF2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.26■■□□□ 1.31
Cdhr5Q8VHF2 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.26■■□□□ 1.31
Cdhr5Q8VHF2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.26■■□□□ 1.31
Cdhr5Q8VHF2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cdhr5Q8VHF2 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cdhr5Q8VHF2 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cdhr5Q8VHF2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Cdhr5Q8VHF2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cdhr5Q8VHF2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Cdhr5Q8VHF2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cdhr5Q8VHF2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Cdhr5Q8VHF2 Mipep-204ENSMUST00000225043 1548 ntBASIC23.21■■□□□ 1.31
Cdhr5Q8VHF2 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cdhr5Q8VHF2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cdhr5Q8VHF2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Cdhr5Q8VHF2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cdhr5Q8VHF2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdhr5Q8VHF2 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Cdhr5Q8VHF2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cdhr5Q8VHF2 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cdhr5Q8VHF2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cdhr5Q8VHF2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cdhr5Q8VHF2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdhr5Q8VHF2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.14■■□□□ 1.29
Cdhr5Q8VHF2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cdhr5Q8VHF2 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdhr5Q8VHF2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cdhr5Q8VHF2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Cdhr5Q8VHF2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdhr5Q8VHF2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdhr5Q8VHF2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdhr5Q8VHF2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cdhr5Q8VHF2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cdhr5Q8VHF2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cdhr5Q8VHF2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Cdhr5Q8VHF2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Cdhr5Q8VHF2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Cdhr5Q8VHF2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.09■■□□□ 1.29
Cdhr5Q8VHF2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Cdhr5Q8VHF2 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Cdhr5Q8VHF2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Cdhr5Q8VHF2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdhr5Q8VHF2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Cdhr5Q8VHF2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Cdhr5Q8VHF2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cdhr5Q8VHF2 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms