Protein–RNA interactions for Protein: Q8R2B9

Vmn1r59, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r59Q8R2B9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Vmn1r59Q8R2B9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
Vmn1r59Q8R2B9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.03■■□□□ 1.12
Vmn1r59Q8R2B9 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC22.02■■□□□ 1.12
Vmn1r59Q8R2B9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC22■■□□□ 1.11
Vmn1r59Q8R2B9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22■■□□□ 1.11
Vmn1r59Q8R2B9 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.99■■□□□ 1.11
Vmn1r59Q8R2B9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Vmn1r59Q8R2B9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vmn1r59Q8R2B9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
Vmn1r59Q8R2B9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Vmn1r59Q8R2B9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Vmn1r59Q8R2B9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vmn1r59Q8R2B9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Vmn1r59Q8R2B9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Vmn1r59Q8R2B9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.95■■□□□ 1.1
Vmn1r59Q8R2B9 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
Vmn1r59Q8R2B9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Vmn1r59Q8R2B9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vmn1r59Q8R2B9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Vmn1r59Q8R2B9 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Vmn1r59Q8R2B9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Vmn1r59Q8R2B9 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.9■■□□□ 1.1
Vmn1r59Q8R2B9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Vmn1r59Q8R2B9 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.89■■□□□ 1.09
Vmn1r59Q8R2B9 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.88■■□□□ 1.09
Vmn1r59Q8R2B9 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Vmn1r59Q8R2B9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vmn1r59Q8R2B9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r59Q8R2B9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r59Q8R2B9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Vmn1r59Q8R2B9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r59Q8R2B9 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r59Q8R2B9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r59Q8R2B9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Vmn1r59Q8R2B9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vmn1r59Q8R2B9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vmn1r59Q8R2B9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Vmn1r59Q8R2B9 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vmn1r59Q8R2B9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vmn1r59Q8R2B9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vmn1r59Q8R2B9 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.85■■□□□ 1.09
Vmn1r59Q8R2B9 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Vmn1r59Q8R2B9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vmn1r59Q8R2B9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
Vmn1r59Q8R2B9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vmn1r59Q8R2B9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vmn1r59Q8R2B9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Vmn1r59Q8R2B9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vmn1r59Q8R2B9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vmn1r59Q8R2B9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vmn1r59Q8R2B9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vmn1r59Q8R2B9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Vmn1r59Q8R2B9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vmn1r59Q8R2B9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.79■■□□□ 1.08
Vmn1r59Q8R2B9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vmn1r59Q8R2B9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Vmn1r59Q8R2B9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Vmn1r59Q8R2B9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Vmn1r59Q8R2B9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vmn1r59Q8R2B9 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vmn1r59Q8R2B9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vmn1r59Q8R2B9 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.75■■□□□ 1.07
Vmn1r59Q8R2B9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vmn1r59Q8R2B9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vmn1r59Q8R2B9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Vmn1r59Q8R2B9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.74■■□□□ 1.07
Vmn1r59Q8R2B9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.74■■□□□ 1.07
Vmn1r59Q8R2B9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vmn1r59Q8R2B9 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vmn1r59Q8R2B9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r59Q8R2B9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vmn1r59Q8R2B9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r59Q8R2B9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vmn1r59Q8R2B9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Vmn1r59Q8R2B9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Vmn1r59Q8R2B9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vmn1r59Q8R2B9 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vmn1r59Q8R2B9 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vmn1r59Q8R2B9 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vmn1r59Q8R2B9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
Vmn1r59Q8R2B9 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r59Q8R2B9 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vmn1r59Q8R2B9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r59Q8R2B9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vmn1r59Q8R2B9 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Vmn1r59Q8R2B9 Gm45855-201ENSMUST00000212546 880 ntBASIC21.65■■□□□ 1.06
Vmn1r59Q8R2B9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
Vmn1r59Q8R2B9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Vmn1r59Q8R2B9 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.63■■□□□ 1.05
Vmn1r59Q8R2B9 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r59Q8R2B9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vmn1r59Q8R2B9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Vmn1r59Q8R2B9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r59Q8R2B9 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r59Q8R2B9 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vmn1r59Q8R2B9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Vmn1r59Q8R2B9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r59Q8R2B9 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vmn1r59Q8R2B9 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms