Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist3h2bbQ8CGP0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist3h2bbQ8CGP0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist3h2bbQ8CGP0 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hist3h2bbQ8CGP0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Hist3h2bbQ8CGP0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Hist3h2bbQ8CGP0 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Hist3h2bbQ8CGP0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Hist3h2bbQ8CGP0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Hist3h2bbQ8CGP0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Hist3h2bbQ8CGP0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.35■□□□□ 0.69
Hist3h2bbQ8CGP0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist3h2bbQ8CGP0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist3h2bbQ8CGP0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hist3h2bbQ8CGP0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist3h2bbQ8CGP0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hist3h2bbQ8CGP0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hist3h2bbQ8CGP0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Hist3h2bbQ8CGP0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hist3h2bbQ8CGP0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist3h2bbQ8CGP0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.32■□□□□ 0.68
Hist3h2bbQ8CGP0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hist3h2bbQ8CGP0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hist3h2bbQ8CGP0 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hist3h2bbQ8CGP0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hist3h2bbQ8CGP0 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hist3h2bbQ8CGP0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hist3h2bbQ8CGP0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Hist3h2bbQ8CGP0 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC19.26■□□□□ 0.67
Hist3h2bbQ8CGP0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hist3h2bbQ8CGP0 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Hist3h2bbQ8CGP0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hist3h2bbQ8CGP0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hist3h2bbQ8CGP0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.23■□□□□ 0.67
Hist3h2bbQ8CGP0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Hist3h2bbQ8CGP0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hist3h2bbQ8CGP0 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hist3h2bbQ8CGP0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hist3h2bbQ8CGP0 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hist3h2bbQ8CGP0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hist3h2bbQ8CGP0 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hist3h2bbQ8CGP0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hist3h2bbQ8CGP0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hist3h2bbQ8CGP0 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.2■□□□□ 0.66
Hist3h2bbQ8CGP0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hist3h2bbQ8CGP0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hist3h2bbQ8CGP0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hist3h2bbQ8CGP0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hist3h2bbQ8CGP0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hist3h2bbQ8CGP0 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.17■□□□□ 0.66
Hist3h2bbQ8CGP0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hist3h2bbQ8CGP0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hist3h2bbQ8CGP0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hist3h2bbQ8CGP0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hist3h2bbQ8CGP0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hist3h2bbQ8CGP0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hist3h2bbQ8CGP0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hist3h2bbQ8CGP0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hist3h2bbQ8CGP0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Hist3h2bbQ8CGP0 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hist3h2bbQ8CGP0 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hist3h2bbQ8CGP0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hist3h2bbQ8CGP0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Hist3h2bbQ8CGP0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hist3h2bbQ8CGP0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hist3h2bbQ8CGP0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Hist3h2bbQ8CGP0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
Hist3h2bbQ8CGP0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.1■□□□□ 0.65
Hist3h2bbQ8CGP0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hist3h2bbQ8CGP0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Hist3h2bbQ8CGP0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Hist3h2bbQ8CGP0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Hist3h2bbQ8CGP0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Hist3h2bbQ8CGP0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Hist3h2bbQ8CGP0 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Hist3h2bbQ8CGP0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hist3h2bbQ8CGP0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Hist3h2bbQ8CGP0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hist3h2bbQ8CGP0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Hist3h2bbQ8CGP0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hist3h2bbQ8CGP0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Hist3h2bbQ8CGP0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hist3h2bbQ8CGP0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.02■□□□□ 0.64
Hist3h2bbQ8CGP0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Hist3h2bbQ8CGP0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Hist3h2bbQ8CGP0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Hist3h2bbQ8CGP0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Hist3h2bbQ8CGP0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Hist3h2bbQ8CGP0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Hist3h2bbQ8CGP0 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.98■□□□□ 0.63
Hist3h2bbQ8CGP0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hist3h2bbQ8CGP0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hist3h2bbQ8CGP0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Hist3h2bbQ8CGP0 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Hist3h2bbQ8CGP0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Hist3h2bbQ8CGP0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.97■□□□□ 0.63
Hist3h2bbQ8CGP0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hist3h2bbQ8CGP0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.96■□□□□ 0.63
Hist3h2bbQ8CGP0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hist3h2bbQ8CGP0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms