Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco3Q8BQM7 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Smco3Q8BQM7 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Smco3Q8BQM7 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smco3Q8BQM7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
Smco3Q8BQM7 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smco3Q8BQM7 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smco3Q8BQM7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.57■□□□□ 0.88
Smco3Q8BQM7 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smco3Q8BQM7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.56■□□□□ 0.88
Smco3Q8BQM7 Mipep-204ENSMUST00000225043 1548 ntBASIC20.56■□□□□ 0.88
Smco3Q8BQM7 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Smco3Q8BQM7 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smco3Q8BQM7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smco3Q8BQM7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Smco3Q8BQM7 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Smco3Q8BQM7 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.54■□□□□ 0.88
Smco3Q8BQM7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smco3Q8BQM7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smco3Q8BQM7 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smco3Q8BQM7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smco3Q8BQM7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smco3Q8BQM7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Smco3Q8BQM7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Smco3Q8BQM7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smco3Q8BQM7 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Smco3Q8BQM7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Smco3Q8BQM7 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
Smco3Q8BQM7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smco3Q8BQM7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.51■□□□□ 0.87
Smco3Q8BQM7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smco3Q8BQM7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smco3Q8BQM7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smco3Q8BQM7 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smco3Q8BQM7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smco3Q8BQM7 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Smco3Q8BQM7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Smco3Q8BQM7 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smco3Q8BQM7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smco3Q8BQM7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smco3Q8BQM7 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smco3Q8BQM7 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Smco3Q8BQM7 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.46■□□□□ 0.87
Smco3Q8BQM7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smco3Q8BQM7 Amer2-203ENSMUST00000225247 2662 ntBASIC20.45■□□□□ 0.86
Smco3Q8BQM7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smco3Q8BQM7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Smco3Q8BQM7 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smco3Q8BQM7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smco3Q8BQM7 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smco3Q8BQM7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smco3Q8BQM7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smco3Q8BQM7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smco3Q8BQM7 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smco3Q8BQM7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smco3Q8BQM7 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smco3Q8BQM7 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smco3Q8BQM7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smco3Q8BQM7 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smco3Q8BQM7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smco3Q8BQM7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smco3Q8BQM7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Smco3Q8BQM7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.33■□□□□ 0.85
Smco3Q8BQM7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Smco3Q8BQM7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.32■□□□□ 0.84
Smco3Q8BQM7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smco3Q8BQM7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smco3Q8BQM7 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Smco3Q8BQM7 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smco3Q8BQM7 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Smco3Q8BQM7 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smco3Q8BQM7 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Smco3Q8BQM7 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smco3Q8BQM7 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smco3Q8BQM7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smco3Q8BQM7 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smco3Q8BQM7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smco3Q8BQM7 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Smco3Q8BQM7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Smco3Q8BQM7 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smco3Q8BQM7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smco3Q8BQM7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smco3Q8BQM7 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smco3Q8BQM7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.2■□□□□ 0.82
Smco3Q8BQM7 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Smco3Q8BQM7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smco3Q8BQM7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smco3Q8BQM7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smco3Q8BQM7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smco3Q8BQM7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smco3Q8BQM7 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smco3Q8BQM7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smco3Q8BQM7 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smco3Q8BQM7 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smco3Q8BQM7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Smco3Q8BQM7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smco3Q8BQM7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smco3Q8BQM7 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smco3Q8BQM7 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smco3Q8BQM7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms