Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cdhr3Q8BL00 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.1■■□□□ 1.13
Cdhr3Q8BL00 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Cdhr3Q8BL00 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cdhr3Q8BL00 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdhr3Q8BL00 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cdhr3Q8BL00 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Cdhr3Q8BL00 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cdhr3Q8BL00 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.04■■□□□ 1.12
Cdhr3Q8BL00 Amer2-203ENSMUST00000225247 2662 ntBASIC22.03■■□□□ 1.12
Cdhr3Q8BL00 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr3Q8BL00 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
Cdhr3Q8BL00 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cdhr3Q8BL00 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cdhr3Q8BL00 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Cdhr3Q8BL00 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Cdhr3Q8BL00 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22■■□□□ 1.11
Cdhr3Q8BL00 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cdhr3Q8BL00 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
Cdhr3Q8BL00 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
Cdhr3Q8BL00 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdhr3Q8BL00 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdhr3Q8BL00 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdhr3Q8BL00 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cdhr3Q8BL00 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cdhr3Q8BL00 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdhr3Q8BL00 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cdhr3Q8BL00 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdhr3Q8BL00 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Cdhr3Q8BL00 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
Cdhr3Q8BL00 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdhr3Q8BL00 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.94■■□□□ 1.1
Cdhr3Q8BL00 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdhr3Q8BL00 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdhr3Q8BL00 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdhr3Q8BL00 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdhr3Q8BL00 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdhr3Q8BL00 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cdhr3Q8BL00 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Cdhr3Q8BL00 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.9■■□□□ 1.1
Cdhr3Q8BL00 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.9■■□□□ 1.1
Cdhr3Q8BL00 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
Cdhr3Q8BL00 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cdhr3Q8BL00 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdhr3Q8BL00 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cdhr3Q8BL00 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.88■■□□□ 1.09
Cdhr3Q8BL00 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.88■■□□□ 1.09
Cdhr3Q8BL00 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Cdhr3Q8BL00 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdhr3Q8BL00 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.87■■□□□ 1.09
Cdhr3Q8BL00 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Cdhr3Q8BL00 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr3Q8BL00 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdhr3Q8BL00 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr3Q8BL00 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdhr3Q8BL00 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdhr3Q8BL00 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.82■■□□□ 1.08
Cdhr3Q8BL00 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Cdhr3Q8BL00 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdhr3Q8BL00 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.79■■□□□ 1.08
Cdhr3Q8BL00 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdhr3Q8BL00 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdhr3Q8BL00 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdhr3Q8BL00 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Cdhr3Q8BL00 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cdhr3Q8BL00 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdhr3Q8BL00 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cdhr3Q8BL00 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.76■■□□□ 1.07
Cdhr3Q8BL00 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cdhr3Q8BL00 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdhr3Q8BL00 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.75■■□□□ 1.07
Cdhr3Q8BL00 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdhr3Q8BL00 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdhr3Q8BL00 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdhr3Q8BL00 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdhr3Q8BL00 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdhr3Q8BL00 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdhr3Q8BL00 Peli2-204ENSMUST00000226513 1320 ntBASIC21.73■■□□□ 1.07
Cdhr3Q8BL00 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdhr3Q8BL00 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.72■■□□□ 1.07
Cdhr3Q8BL00 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdhr3Q8BL00 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdhr3Q8BL00 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdhr3Q8BL00 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Cdhr3Q8BL00 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdhr3Q8BL00 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr3Q8BL00 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr3Q8BL00 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr3Q8BL00 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr3Q8BL00 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdhr3Q8BL00 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdhr3Q8BL00 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdhr3Q8BL00 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdhr3Q8BL00 Gm8109-201ENSMUST00000194076 746 ntBASIC21.64■■□□□ 1.05
Cdhr3Q8BL00 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Cdhr3Q8BL00 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdhr3Q8BL00 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdhr3Q8BL00 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdhr3Q8BL00 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdhr3Q8BL00 Gm26115-201ENSMUST00000175605 87 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms