Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Srrm4Q8BKA3 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Srrm4Q8BKA3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Srrm4Q8BKA3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Srrm4Q8BKA3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
Srrm4Q8BKA3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Srrm4Q8BKA3 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.87■■□□□ 1.09
Srrm4Q8BKA3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Srrm4Q8BKA3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Srrm4Q8BKA3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.85■■□□□ 1.09
Srrm4Q8BKA3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Srrm4Q8BKA3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.85■■□□□ 1.09
Srrm4Q8BKA3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Srrm4Q8BKA3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Srrm4Q8BKA3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Srrm4Q8BKA3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.84■■□□□ 1.09
Srrm4Q8BKA3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Srrm4Q8BKA3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.84■■□□□ 1.09
Srrm4Q8BKA3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Srrm4Q8BKA3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Srrm4Q8BKA3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Srrm4Q8BKA3 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
Srrm4Q8BKA3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Srrm4Q8BKA3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
Srrm4Q8BKA3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.82■■□□□ 1.08
Srrm4Q8BKA3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Srrm4Q8BKA3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Srrm4Q8BKA3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Srrm4Q8BKA3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Srrm4Q8BKA3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Srrm4Q8BKA3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.8■■□□□ 1.08
Srrm4Q8BKA3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Srrm4Q8BKA3 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Srrm4Q8BKA3 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Srrm4Q8BKA3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Srrm4Q8BKA3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Srrm4Q8BKA3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Srrm4Q8BKA3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Srrm4Q8BKA3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Srrm4Q8BKA3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Srrm4Q8BKA3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Srrm4Q8BKA3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Srrm4Q8BKA3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Srrm4Q8BKA3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.73■■□□□ 1.07
Srrm4Q8BKA3 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Srrm4Q8BKA3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Srrm4Q8BKA3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Srrm4Q8BKA3 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Srrm4Q8BKA3 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.7■■□□□ 1.06
Srrm4Q8BKA3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Srrm4Q8BKA3 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Srrm4Q8BKA3 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.68■■□□□ 1.06
Srrm4Q8BKA3 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Srrm4Q8BKA3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Srrm4Q8BKA3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Srrm4Q8BKA3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Srrm4Q8BKA3 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm4Q8BKA3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm4Q8BKA3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm4Q8BKA3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm4Q8BKA3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm4Q8BKA3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm4Q8BKA3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Srrm4Q8BKA3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Srrm4Q8BKA3 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.62■■□□□ 1.05
Srrm4Q8BKA3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Srrm4Q8BKA3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Srrm4Q8BKA3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Srrm4Q8BKA3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Srrm4Q8BKA3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Srrm4Q8BKA3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm4Q8BKA3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm4Q8BKA3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm4Q8BKA3 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.59■■□□□ 1.05
Srrm4Q8BKA3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Srrm4Q8BKA3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Srrm4Q8BKA3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Srrm4Q8BKA3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Srrm4Q8BKA3 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Srrm4Q8BKA3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Srrm4Q8BKA3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Srrm4Q8BKA3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Srrm4Q8BKA3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Srrm4Q8BKA3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Srrm4Q8BKA3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Srrm4Q8BKA3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.53■■□□□ 1.04
Srrm4Q8BKA3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Srrm4Q8BKA3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Srrm4Q8BKA3 Gm9397-201ENSMUST00000200125 605 ntBASIC21.51■■□□□ 1.03
Srrm4Q8BKA3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.51■■□□□ 1.03
Srrm4Q8BKA3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Srrm4Q8BKA3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Srrm4Q8BKA3 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Srrm4Q8BKA3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Srrm4Q8BKA3 Gm45855-201ENSMUST00000212546 880 ntBASIC21.49■■□□□ 1.03
Srrm4Q8BKA3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
Srrm4Q8BKA3 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
Srrm4Q8BKA3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.48■■□□□ 1.03
Srrm4Q8BKA3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Srrm4Q8BKA3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms