Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.14■■□□□ 1.13
Slc5a7Q8BGY9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Slc5a7Q8BGY9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Slc5a7Q8BGY9 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Slc5a7Q8BGY9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Slc5a7Q8BGY9 Rab21-202ENSMUST00000218831 843 ntBASIC22.11■■□□□ 1.13
Slc5a7Q8BGY9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Slc5a7Q8BGY9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
Slc5a7Q8BGY9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Slc5a7Q8BGY9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
Slc5a7Q8BGY9 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.08■■□□□ 1.13
Slc5a7Q8BGY9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Slc5a7Q8BGY9 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc5a7Q8BGY9 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc5a7Q8BGY9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc5a7Q8BGY9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.07■■□□□ 1.12
Slc5a7Q8BGY9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Slc5a7Q8BGY9 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Slc5a7Q8BGY9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.06■■□□□ 1.12
Slc5a7Q8BGY9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Slc5a7Q8BGY9 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.05■■□□□ 1.12
Slc5a7Q8BGY9 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Slc5a7Q8BGY9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Slc5a7Q8BGY9 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Slc5a7Q8BGY9 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Slc5a7Q8BGY9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.03■■□□□ 1.12
Slc5a7Q8BGY9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Slc5a7Q8BGY9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Slc5a7Q8BGY9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Slc5a7Q8BGY9 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Slc5a7Q8BGY9 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Slc5a7Q8BGY9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Slc5a7Q8BGY9 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22■■□□□ 1.11
Slc5a7Q8BGY9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22■■□□□ 1.11
Slc5a7Q8BGY9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Slc5a7Q8BGY9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Slc5a7Q8BGY9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.97■■□□□ 1.11
Slc5a7Q8BGY9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.97■■□□□ 1.11
Slc5a7Q8BGY9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.96■■□□□ 1.11
Slc5a7Q8BGY9 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Slc5a7Q8BGY9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.95■■□□□ 1.1
Slc5a7Q8BGY9 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Slc5a7Q8BGY9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Slc5a7Q8BGY9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc5a7Q8BGY9 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc5a7Q8BGY9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Slc5a7Q8BGY9 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc5a7Q8BGY9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Slc5a7Q8BGY9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Slc5a7Q8BGY9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Slc5a7Q8BGY9 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.91■■□□□ 1.1
Slc5a7Q8BGY9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Slc5a7Q8BGY9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Slc5a7Q8BGY9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Slc5a7Q8BGY9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Slc5a7Q8BGY9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Slc5a7Q8BGY9 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc5a7Q8BGY9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc5a7Q8BGY9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc5a7Q8BGY9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.88■■□□□ 1.09
Slc5a7Q8BGY9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Slc5a7Q8BGY9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Slc5a7Q8BGY9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Slc5a7Q8BGY9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc5a7Q8BGY9 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Slc5a7Q8BGY9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Slc5a7Q8BGY9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc5a7Q8BGY9 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc5a7Q8BGY9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc5a7Q8BGY9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc5a7Q8BGY9 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc5a7Q8BGY9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc5a7Q8BGY9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Slc5a7Q8BGY9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Slc5a7Q8BGY9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc5a7Q8BGY9 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Slc5a7Q8BGY9 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Slc5a7Q8BGY9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.81■■□□□ 1.08
Slc5a7Q8BGY9 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Slc5a7Q8BGY9 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Slc5a7Q8BGY9 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Slc5a7Q8BGY9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc5a7Q8BGY9 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Slc5a7Q8BGY9 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Slc5a7Q8BGY9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc5a7Q8BGY9 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Slc5a7Q8BGY9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.76■■□□□ 1.07
Slc5a7Q8BGY9 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slc5a7Q8BGY9 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc5a7Q8BGY9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slc5a7Q8BGY9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slc5a7Q8BGY9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Slc5a7Q8BGY9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc5a7Q8BGY9 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc5a7Q8BGY9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc5a7Q8BGY9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc5a7Q8BGY9 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc5a7Q8BGY9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slc5a7Q8BGY9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slc5a7Q8BGY9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms