Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limd2Q8BGB5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Limd2Q8BGB5 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Limd2Q8BGB5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Limd2Q8BGB5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limd2Q8BGB5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limd2Q8BGB5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Limd2Q8BGB5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Limd2Q8BGB5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limd2Q8BGB5 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limd2Q8BGB5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limd2Q8BGB5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limd2Q8BGB5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Limd2Q8BGB5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC13.89□□□□□ -0.19
Limd2Q8BGB5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Limd2Q8BGB5 Gm6658-202ENSMUST00000209493 1885 ntBASIC13.89□□□□□ -0.19
Limd2Q8BGB5 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Limd2Q8BGB5 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Limd2Q8BGB5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limd2Q8BGB5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Limd2Q8BGB5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limd2Q8BGB5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Limd2Q8BGB5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Limd2Q8BGB5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Limd2Q8BGB5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Limd2Q8BGB5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Limd2Q8BGB5 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC13.83□□□□□ -0.2
Limd2Q8BGB5 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Limd2Q8BGB5 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Limd2Q8BGB5 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Limd2Q8BGB5 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limd2Q8BGB5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Limd2Q8BGB5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limd2Q8BGB5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Limd2Q8BGB5 Fezf2-202ENSMUST00000224023 1917 ntBASIC13.8□□□□□ -0.2
Limd2Q8BGB5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Limd2Q8BGB5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Limd2Q8BGB5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Limd2Q8BGB5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Limd2Q8BGB5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Limd2Q8BGB5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Limd2Q8BGB5 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Limd2Q8BGB5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Limd2Q8BGB5 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Limd2Q8BGB5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limd2Q8BGB5 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limd2Q8BGB5 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limd2Q8BGB5 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limd2Q8BGB5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limd2Q8BGB5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Limd2Q8BGB5 Gm43445-201ENSMUST00000198564 2091 ntBASIC13.75□□□□□ -0.21
Limd2Q8BGB5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Limd2Q8BGB5 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Limd2Q8BGB5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Limd2Q8BGB5 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Limd2Q8BGB5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Limd2Q8BGB5 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Limd2Q8BGB5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Limd2Q8BGB5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Limd2Q8BGB5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Limd2Q8BGB5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Limd2Q8BGB5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limd2Q8BGB5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Limd2Q8BGB5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Limd2Q8BGB5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Limd2Q8BGB5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limd2Q8BGB5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Limd2Q8BGB5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Limd2Q8BGB5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Limd2Q8BGB5 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Limd2Q8BGB5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Limd2Q8BGB5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Limd2Q8BGB5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Limd2Q8BGB5 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Limd2Q8BGB5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Limd2Q8BGB5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Limd2Q8BGB5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Limd2Q8BGB5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Limd2Q8BGB5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Limd2Q8BGB5 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limd2Q8BGB5 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Limd2Q8BGB5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limd2Q8BGB5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limd2Q8BGB5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limd2Q8BGB5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Limd2Q8BGB5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Limd2Q8BGB5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limd2Q8BGB5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limd2Q8BGB5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC13.64□□□□□ -0.23
Limd2Q8BGB5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limd2Q8BGB5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Limd2Q8BGB5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC13.63□□□□□ -0.23
Limd2Q8BGB5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Limd2Q8BGB5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Limd2Q8BGB5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Limd2Q8BGB5 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limd2Q8BGB5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limd2Q8BGB5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limd2Q8BGB5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Limd2Q8BGB5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 145.4 ms