Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Sh3tc2Q80VA5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
Sh3tc2Q80VA5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Sh3tc2Q80VA5 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sh3tc2Q80VA5 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Sh3tc2Q80VA5 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.87■■■□□ 2.05
Sh3tc2Q80VA5 Gm9939-201ENSMUST00000067161 1154 ntBASIC27.84■■■□□ 2.05
Sh3tc2Q80VA5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Sh3tc2Q80VA5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
Sh3tc2Q80VA5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.8■■■□□ 2.04
Sh3tc2Q80VA5 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Sh3tc2Q80VA5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.79■■■□□ 2.04
Sh3tc2Q80VA5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Sh3tc2Q80VA5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.77■■■□□ 2.04
Sh3tc2Q80VA5 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sh3tc2Q80VA5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC27.77■■■□□ 2.04
Sh3tc2Q80VA5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
Sh3tc2Q80VA5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Sh3tc2Q80VA5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.73■■■□□ 2.03
Sh3tc2Q80VA5 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Sh3tc2Q80VA5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Sh3tc2Q80VA5 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
Sh3tc2Q80VA5 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Sh3tc2Q80VA5 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.7■■■□□ 2.03
Sh3tc2Q80VA5 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Sh3tc2Q80VA5 Gm8503-201ENSMUST00000118131 455 ntBASIC27.69■■■□□ 2.02
Sh3tc2Q80VA5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC27.68■■■□□ 2.02
Sh3tc2Q80VA5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sh3tc2Q80VA5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Sh3tc2Q80VA5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Sh3tc2Q80VA5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
Sh3tc2Q80VA5 Gm6821-201ENSMUST00000107540 542 ntBASIC27.63■■■□□ 2.01
Sh3tc2Q80VA5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Sh3tc2Q80VA5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC27.62■■■□□ 2.01
Sh3tc2Q80VA5 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
Sh3tc2Q80VA5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
Sh3tc2Q80VA5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC27.56■■■□□ 2
Sh3tc2Q80VA5 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.54■■■□□ 2
Sh3tc2Q80VA5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Sh3tc2Q80VA5 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.53■■■□□ 2
Sh3tc2Q80VA5 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
Sh3tc2Q80VA5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC27.52■■■□□ 2
Sh3tc2Q80VA5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Sh3tc2Q80VA5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Sh3tc2Q80VA5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
Sh3tc2Q80VA5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC27.5■■□□□ 1.99
Sh3tc2Q80VA5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
Sh3tc2Q80VA5 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Sh3tc2Q80VA5 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Sh3tc2Q80VA5 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
Sh3tc2Q80VA5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Sh3tc2Q80VA5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
Sh3tc2Q80VA5 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC27.43■■□□□ 1.98
Sh3tc2Q80VA5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Sh3tc2Q80VA5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Sh3tc2Q80VA5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
Sh3tc2Q80VA5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC27.43■■□□□ 1.98
Sh3tc2Q80VA5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Sh3tc2Q80VA5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
Sh3tc2Q80VA5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Sh3tc2Q80VA5 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.41■■□□□ 1.98
Sh3tc2Q80VA5 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
Sh3tc2Q80VA5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.4■■□□□ 1.98
Sh3tc2Q80VA5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Sh3tc2Q80VA5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Sh3tc2Q80VA5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Sh3tc2Q80VA5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Sh3tc2Q80VA5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Sh3tc2Q80VA5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Sh3tc2Q80VA5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Sh3tc2Q80VA5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.31■■□□□ 1.96
Sh3tc2Q80VA5 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.31■■□□□ 1.96
Sh3tc2Q80VA5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Sh3tc2Q80VA5 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Sh3tc2Q80VA5 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Sh3tc2Q80VA5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.28■■□□□ 1.96
Sh3tc2Q80VA5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Sh3tc2Q80VA5 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Sh3tc2Q80VA5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC27.28■■□□□ 1.96
Sh3tc2Q80VA5 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Sh3tc2Q80VA5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Sh3tc2Q80VA5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.27■■□□□ 1.96
Sh3tc2Q80VA5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Sh3tc2Q80VA5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.26■■□□□ 1.96
Sh3tc2Q80VA5 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Sh3tc2Q80VA5 Gm42809-201ENSMUST00000198429 1138 ntBASIC27.24■■□□□ 1.95
Sh3tc2Q80VA5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Sh3tc2Q80VA5 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.22■■□□□ 1.95
Sh3tc2Q80VA5 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Sh3tc2Q80VA5 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Sh3tc2Q80VA5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Sh3tc2Q80VA5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Sh3tc2Q80VA5 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Sh3tc2Q80VA5 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Sh3tc2Q80VA5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.19■■□□□ 1.94
Sh3tc2Q80VA5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Sh3tc2Q80VA5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Sh3tc2Q80VA5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
Sh3tc2Q80VA5 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Sh3tc2Q80VA5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms