Protein–RNA interactions for Protein: Q6P4S6

Sik3, Serine/threonine-protein kinase SIK3, mousemouse

Predictions only

Length 1,311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sik3Q6P4S6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
Sik3Q6P4S6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC30.96■■■□□ 2.55
Sik3Q6P4S6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
Sik3Q6P4S6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
Sik3Q6P4S6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
Sik3Q6P4S6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Sik3Q6P4S6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Sik3Q6P4S6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
Sik3Q6P4S6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
Sik3Q6P4S6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC30.9■■■□□ 2.54
Sik3Q6P4S6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
Sik3Q6P4S6 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.87■■■□□ 2.53
Sik3Q6P4S6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Sik3Q6P4S6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
Sik3Q6P4S6 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC30.82■■■□□ 2.52
Sik3Q6P4S6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.81■■■□□ 2.52
Sik3Q6P4S6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
Sik3Q6P4S6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Sik3Q6P4S6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC30.77■■■□□ 2.52
Sik3Q6P4S6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Sik3Q6P4S6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Sik3Q6P4S6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC30.73■■■□□ 2.51
Sik3Q6P4S6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Sik3Q6P4S6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
Sik3Q6P4S6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
Sik3Q6P4S6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.7■■■□□ 2.5
Sik3Q6P4S6 Gm24970-201ENSMUST00000175582 82 ntBASIC30.69■■■□□ 2.5
Sik3Q6P4S6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Sik3Q6P4S6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Sik3Q6P4S6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Sik3Q6P4S6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
Sik3Q6P4S6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC30.64■■■□□ 2.5
Sik3Q6P4S6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Sik3Q6P4S6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
Sik3Q6P4S6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.63■■■□□ 2.49
Sik3Q6P4S6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Sik3Q6P4S6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Sik3Q6P4S6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Sik3Q6P4S6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
Sik3Q6P4S6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Sik3Q6P4S6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC30.59■■■□□ 2.49
Sik3Q6P4S6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC30.57■■■□□ 2.48
Sik3Q6P4S6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Sik3Q6P4S6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Sik3Q6P4S6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Sik3Q6P4S6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Sik3Q6P4S6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Sik3Q6P4S6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Sik3Q6P4S6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
Sik3Q6P4S6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC30.52■■■□□ 2.48
Sik3Q6P4S6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC30.52■■■□□ 2.48
Sik3Q6P4S6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC30.52■■■□□ 2.48
Sik3Q6P4S6 Gm5987-201ENSMUST00000196433 1151 ntBASIC30.51■■■□□ 2.48
Sik3Q6P4S6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Sik3Q6P4S6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.5■■■□□ 2.47
Sik3Q6P4S6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Sik3Q6P4S6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
Sik3Q6P4S6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC30.48■■■□□ 2.47
Sik3Q6P4S6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Sik3Q6P4S6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
Sik3Q6P4S6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Sik3Q6P4S6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Sik3Q6P4S6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Sik3Q6P4S6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
Sik3Q6P4S6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Sik3Q6P4S6 Gm9939-201ENSMUST00000067161 1154 ntBASIC30.41■■■□□ 2.46
Sik3Q6P4S6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC30.4■■■□□ 2.46
Sik3Q6P4S6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Sik3Q6P4S6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
Sik3Q6P4S6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Sik3Q6P4S6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
Sik3Q6P4S6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC30.37■■■□□ 2.45
Sik3Q6P4S6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Sik3Q6P4S6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Sik3Q6P4S6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Sik3Q6P4S6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Sik3Q6P4S6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
Sik3Q6P4S6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
Sik3Q6P4S6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Sik3Q6P4S6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Sik3Q6P4S6 Gm43863-201ENSMUST00000203822 1192 ntBASIC30.29■■■□□ 2.44
Sik3Q6P4S6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Sik3Q6P4S6 Gm8503-201ENSMUST00000118131 455 ntBASIC30.28■■■□□ 2.44
Sik3Q6P4S6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
Sik3Q6P4S6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Sik3Q6P4S6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Sik3Q6P4S6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Sik3Q6P4S6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.26■■■□□ 2.43
Sik3Q6P4S6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.25■■■□□ 2.43
Sik3Q6P4S6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
Sik3Q6P4S6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Sik3Q6P4S6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Sik3Q6P4S6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Sik3Q6P4S6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Sik3Q6P4S6 Gm6821-201ENSMUST00000107540 542 ntBASIC30.21■■■□□ 2.43
Sik3Q6P4S6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Sik3Q6P4S6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC30.19■■■□□ 2.42
Sik3Q6P4S6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
Sik3Q6P4S6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
Sik3Q6P4S6 Gm30346-201ENSMUST00000218641 1699 ntBASIC30.19■■■□□ 2.42
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms