Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Clcn1Q64347 Gm24970-201ENSMUST00000175582 82 ntBASIC32.78■■■□□ 2.84
Clcn1Q64347 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
Clcn1Q64347 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
Clcn1Q64347 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Clcn1Q64347 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.76■■■□□ 2.84
Clcn1Q64347 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
Clcn1Q64347 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Clcn1Q64347 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Clcn1Q64347 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC32.75■■■□□ 2.83
Clcn1Q64347 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Clcn1Q64347 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC32.74■■■□□ 2.83
Clcn1Q64347 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.74■■■□□ 2.83
Clcn1Q64347 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Clcn1Q64347 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC32.73■■■□□ 2.83
Clcn1Q64347 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
Clcn1Q64347 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC32.72■■■□□ 2.83
Clcn1Q64347 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32.71■■■□□ 2.83
Clcn1Q64347 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Clcn1Q64347 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC32.7■■■□□ 2.83
Clcn1Q64347 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
Clcn1Q64347 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Clcn1Q64347 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Clcn1Q64347 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Clcn1Q64347 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Clcn1Q64347 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC32.65■■■□□ 2.82
Clcn1Q64347 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC32.65■■■□□ 2.82
Clcn1Q64347 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC32.63■■■□□ 2.81
Clcn1Q64347 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
Clcn1Q64347 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Clcn1Q64347 Gm5987-201ENSMUST00000196433 1151 ntBASIC32.55■■■□□ 2.8
Clcn1Q64347 Gm9939-201ENSMUST00000067161 1154 ntBASIC32.55■■■□□ 2.8
Clcn1Q64347 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Clcn1Q64347 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Clcn1Q64347 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32.47■■■□□ 2.79
Clcn1Q64347 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Clcn1Q64347 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Clcn1Q64347 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC32.46■■■□□ 2.79
Clcn1Q64347 Gm43863-201ENSMUST00000203822 1192 ntBASIC32.45■■■□□ 2.79
Clcn1Q64347 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
Clcn1Q64347 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Clcn1Q64347 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Clcn1Q64347 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Clcn1Q64347 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Clcn1Q64347 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
Clcn1Q64347 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC32.38■■■□□ 2.77
Clcn1Q64347 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Clcn1Q64347 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC32.37■■■□□ 2.77
Clcn1Q64347 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC32.37■■■□□ 2.77
Clcn1Q64347 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Clcn1Q64347 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Clcn1Q64347 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Clcn1Q64347 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
Clcn1Q64347 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC32.35■■■□□ 2.77
Clcn1Q64347 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Clcn1Q64347 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Clcn1Q64347 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC32.33■■■□□ 2.77
Clcn1Q64347 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
Clcn1Q64347 Gm8503-201ENSMUST00000118131 455 ntBASIC32.31■■■□□ 2.76
Clcn1Q64347 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Clcn1Q64347 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Clcn1Q64347 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Clcn1Q64347 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC32.28■■■□□ 2.76
Clcn1Q64347 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Clcn1Q64347 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC32.27■■■□□ 2.76
Clcn1Q64347 Gm6821-201ENSMUST00000107540 542 ntBASIC32.26■■■□□ 2.75
Clcn1Q64347 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC32.26■■■□□ 2.75
Clcn1Q64347 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Clcn1Q64347 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
Clcn1Q64347 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC32.25■■■□□ 2.75
Clcn1Q64347 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Clcn1Q64347 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC32.24■■■□□ 2.75
Clcn1Q64347 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
Clcn1Q64347 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
Clcn1Q64347 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Clcn1Q64347 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
Clcn1Q64347 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
Clcn1Q64347 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
Clcn1Q64347 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Clcn1Q64347 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Clcn1Q64347 AC157572.2-201ENSMUST00000226970 908 ntBASIC32.14■■■□□ 2.74
Clcn1Q64347 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
Clcn1Q64347 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
Clcn1Q64347 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC32.12■■■□□ 2.73
Clcn1Q64347 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC32.11■■■□□ 2.73
Clcn1Q64347 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Clcn1Q64347 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC32.1■■■□□ 2.73
Clcn1Q64347 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Clcn1Q64347 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Clcn1Q64347 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC32.09■■■□□ 2.73
Clcn1Q64347 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Clcn1Q64347 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Clcn1Q64347 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Clcn1Q64347 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
Clcn1Q64347 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Clcn1Q64347 Gm42809-201ENSMUST00000198429 1138 ntBASIC32.05■■■□□ 2.72
Clcn1Q64347 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Clcn1Q64347 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Clcn1Q64347 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.03■■■□□ 2.72
Clcn1Q64347 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms