Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Notch3Q61982 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.33■□□□□ 0.68
Notch3Q61982 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Notch3Q61982 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Notch3Q61982 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Notch3Q61982 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Notch3Q61982 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Notch3Q61982 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Notch3Q61982 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC19.29■□□□□ 0.68
Notch3Q61982 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Notch3Q61982 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Notch3Q61982 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Notch3Q61982 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Notch3Q61982 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Notch3Q61982 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Notch3Q61982 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Notch3Q61982 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Notch3Q61982 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Notch3Q61982 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Notch3Q61982 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Notch3Q61982 Gm8503-201ENSMUST00000118131 455 ntBASIC19.23■□□□□ 0.67
Notch3Q61982 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Notch3Q61982 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Notch3Q61982 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.22■□□□□ 0.67
Notch3Q61982 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.21■□□□□ 0.67
Notch3Q61982 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Notch3Q61982 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Notch3Q61982 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Notch3Q61982 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Notch3Q61982 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Notch3Q61982 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Notch3Q61982 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Notch3Q61982 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Notch3Q61982 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Notch3Q61982 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Notch3Q61982 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Notch3Q61982 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Notch3Q61982 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Notch3Q61982 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Notch3Q61982 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Notch3Q61982 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Notch3Q61982 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Notch3Q61982 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.13■□□□□ 0.65
Notch3Q61982 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.12■□□□□ 0.65
Notch3Q61982 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Notch3Q61982 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Notch3Q61982 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Notch3Q61982 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Notch3Q61982 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Notch3Q61982 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Notch3Q61982 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
Notch3Q61982 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.08■□□□□ 0.64
Notch3Q61982 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Notch3Q61982 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Notch3Q61982 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Notch3Q61982 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Notch3Q61982 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Notch3Q61982 Gm6821-201ENSMUST00000107540 542 ntBASIC19.05■□□□□ 0.64
Notch3Q61982 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.05■□□□□ 0.64
Notch3Q61982 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Notch3Q61982 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Notch3Q61982 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
Notch3Q61982 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Notch3Q61982 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Notch3Q61982 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Notch3Q61982 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.99■□□□□ 0.63
Notch3Q61982 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Notch3Q61982 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Notch3Q61982 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Notch3Q61982 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Notch3Q61982 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.96■□□□□ 0.63
Notch3Q61982 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Notch3Q61982 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Notch3Q61982 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Notch3Q61982 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Notch3Q61982 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Notch3Q61982 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Notch3Q61982 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Notch3Q61982 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Notch3Q61982 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Notch3Q61982 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Notch3Q61982 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Notch3Q61982 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Notch3Q61982 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Notch3Q61982 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Notch3Q61982 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Notch3Q61982 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Notch3Q61982 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Notch3Q61982 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Notch3Q61982 Gm7432-201ENSMUST00000210343 879 ntBASIC18.89■□□□□ 0.61
Notch3Q61982 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Notch3Q61982 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Notch3Q61982 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.88■□□□□ 0.61
Notch3Q61982 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Notch3Q61982 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.88■□□□□ 0.61
Notch3Q61982 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC18.87■□□□□ 0.61
Notch3Q61982 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Notch3Q61982 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Notch3Q61982 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Notch3Q61982 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms