Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.06■□□□□ 0.96
Abca1P41233 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.05■□□□□ 0.96
Abca1P41233 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Abca1P41233 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Abca1P41233 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.04■□□□□ 0.96
Abca1P41233 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Abca1P41233 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Abca1P41233 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Abca1P41233 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Abca1P41233 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Abca1P41233 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Abca1P41233 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abca1P41233 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abca1P41233 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abca1P41233 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abca1P41233 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Abca1P41233 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Abca1P41233 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.95■□□□□ 0.94
Abca1P41233 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abca1P41233 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Abca1P41233 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Abca1P41233 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Abca1P41233 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Abca1P41233 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Abca1P41233 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Abca1P41233 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Abca1P41233 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.89■□□□□ 0.93
Abca1P41233 Gm6821-201ENSMUST00000107540 542 ntBASIC20.88■□□□□ 0.93
Abca1P41233 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Abca1P41233 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abca1P41233 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.86■□□□□ 0.93
Abca1P41233 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Abca1P41233 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Abca1P41233 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Abca1P41233 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abca1P41233 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Abca1P41233 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abca1P41233 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abca1P41233 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abca1P41233 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abca1P41233 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abca1P41233 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abca1P41233 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Abca1P41233 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Abca1P41233 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Abca1P41233 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Abca1P41233 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Abca1P41233 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Abca1P41233 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.76■□□□□ 0.91
Abca1P41233 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Abca1P41233 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.76■□□□□ 0.91
Abca1P41233 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Abca1P41233 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.74■□□□□ 0.91
Abca1P41233 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abca1P41233 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Abca1P41233 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Abca1P41233 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Abca1P41233 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Abca1P41233 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Abca1P41233 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Abca1P41233 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Abca1P41233 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Abca1P41233 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Abca1P41233 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Abca1P41233 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Abca1P41233 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.66■□□□□ 0.9
Abca1P41233 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Abca1P41233 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.63■□□□□ 0.89
Abca1P41233 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.62■□□□□ 0.89
Abca1P41233 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.62■□□□□ 0.89
Abca1P41233 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Abca1P41233 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Abca1P41233 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Abca1P41233 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Abca1P41233 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca1P41233 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Abca1P41233 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Abca1P41233 Gm7432-201ENSMUST00000210343 879 ntBASIC20.58■□□□□ 0.89
Abca1P41233 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Abca1P41233 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Abca1P41233 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Abca1P41233 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Abca1P41233 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Abca1P41233 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abca1P41233 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Abca1P41233 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abca1P41233 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abca1P41233 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Abca1P41233 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Abca1P41233 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Abca1P41233 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.53■□□□□ 0.88
Abca1P41233 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Abca1P41233 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Abca1P41233 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Abca1P41233 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Abca1P41233 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Abca1P41233 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Abca1P41233 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.49■□□□□ 0.87
Abca1P41233 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.48■□□□□ 0.87
Abca1P41233 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms