Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC27.51■■□□□ 1.99
Ttc3O88196 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Ttc3O88196 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ttc3O88196 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Ttc3O88196 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.48■■□□□ 1.99
Ttc3O88196 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ttc3O88196 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC27.47■■□□□ 1.99
Ttc3O88196 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ttc3O88196 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ttc3O88196 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.46■■□□□ 1.99
Ttc3O88196 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.46■■□□□ 1.99
Ttc3O88196 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Ttc3O88196 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.42■■□□□ 1.98
Ttc3O88196 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
Ttc3O88196 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
Ttc3O88196 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
Ttc3O88196 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.39■■□□□ 1.97
Ttc3O88196 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Ttc3O88196 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC27.38■■□□□ 1.97
Ttc3O88196 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Ttc3O88196 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Ttc3O88196 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Ttc3O88196 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Ttc3O88196 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Ttc3O88196 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ttc3O88196 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Ttc3O88196 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Ttc3O88196 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Ttc3O88196 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.31■■□□□ 1.96
Ttc3O88196 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ttc3O88196 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
Ttc3O88196 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ttc3O88196 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC27.3■■□□□ 1.96
Ttc3O88196 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.3■■□□□ 1.96
Ttc3O88196 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ttc3O88196 Gm24970-201ENSMUST00000175582 82 ntBASIC27.26■■□□□ 1.95
Ttc3O88196 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC27.25■■□□□ 1.95
Ttc3O88196 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ttc3O88196 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ttc3O88196 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.23■■□□□ 1.95
Ttc3O88196 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ttc3O88196 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Ttc3O88196 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Ttc3O88196 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
Ttc3O88196 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
Ttc3O88196 Gm6658-202ENSMUST00000209493 1885 ntBASIC27.21■■□□□ 1.95
Ttc3O88196 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ttc3O88196 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Ttc3O88196 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Ttc3O88196 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Ttc3O88196 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Ttc3O88196 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ttc3O88196 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ttc3O88196 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.17■■□□□ 1.94
Ttc3O88196 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ttc3O88196 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Ttc3O88196 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ttc3O88196 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ttc3O88196 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ttc3O88196 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
Ttc3O88196 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Ttc3O88196 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC27.13■■□□□ 1.93
Ttc3O88196 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.12■■□□□ 1.93
Ttc3O88196 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ttc3O88196 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
Ttc3O88196 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Ttc3O88196 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ttc3O88196 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
Ttc3O88196 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Ttc3O88196 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.06■■□□□ 1.92
Ttc3O88196 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.06■■□□□ 1.92
Ttc3O88196 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Ttc3O88196 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ttc3O88196 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Ttc3O88196 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Ttc3O88196 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Ttc3O88196 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Ttc3O88196 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ttc3O88196 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.99■■□□□ 1.91
Ttc3O88196 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Ttc3O88196 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Ttc3O88196 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.9■■□□□ 1.9
Ttc3O88196 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Ttc3O88196 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Ttc3O88196 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ttc3O88196 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Ttc3O88196 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ttc3O88196 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ttc3O88196 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
Ttc3O88196 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ttc3O88196 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ttc3O88196 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ttc3O88196 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ttc3O88196 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.85■■□□□ 1.89
Ttc3O88196 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.84■■□□□ 1.89
Ttc3O88196 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
Ttc3O88196 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Ttc3O88196 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.83■■□□□ 1.89
Ttc3O88196 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Ttc3O88196 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms