Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
DffbO54788 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DffbO54788 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DffbO54788 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DffbO54788 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DffbO54788 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DffbO54788 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DffbO54788 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DffbO54788 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
DffbO54788 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
DffbO54788 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
DffbO54788 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DffbO54788 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DffbO54788 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DffbO54788 Amer2-203ENSMUST00000225247 2662 ntBASIC21.49■■□□□ 1.03
DffbO54788 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
DffbO54788 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
DffbO54788 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
DffbO54788 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DffbO54788 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DffbO54788 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
DffbO54788 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DffbO54788 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DffbO54788 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.45■■□□□ 1.02
DffbO54788 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DffbO54788 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.44■■□□□ 1.02
DffbO54788 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DffbO54788 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DffbO54788 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
DffbO54788 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
DffbO54788 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.4■■□□□ 1.02
DffbO54788 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
DffbO54788 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
DffbO54788 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DffbO54788 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DffbO54788 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
DffbO54788 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.38■■□□□ 1.01
DffbO54788 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
DffbO54788 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
DffbO54788 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DffbO54788 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DffbO54788 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
DffbO54788 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DffbO54788 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DffbO54788 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DffbO54788 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DffbO54788 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
DffbO54788 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.33■■□□□ 1
DffbO54788 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.32■■□□□ 1
DffbO54788 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
DffbO54788 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.32■■□□□ 1
DffbO54788 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
DffbO54788 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
DffbO54788 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
DffbO54788 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.31■■□□□ 1
DffbO54788 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.31■■□□□ 1
DffbO54788 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.3■■□□□ 1
DffbO54788 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.3■■□□□ 1
DffbO54788 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.28■■□□□ 1
DffbO54788 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
DffbO54788 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.27■□□□□ 0.99
DffbO54788 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
DffbO54788 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.26■□□□□ 0.99
DffbO54788 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.26■□□□□ 0.99
DffbO54788 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC21.25■□□□□ 0.99
DffbO54788 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
DffbO54788 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DffbO54788 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
DffbO54788 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
DffbO54788 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
DffbO54788 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DffbO54788 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
DffbO54788 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
DffbO54788 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
DffbO54788 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
DffbO54788 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.19■□□□□ 0.98
DffbO54788 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DffbO54788 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.19■□□□□ 0.98
DffbO54788 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
DffbO54788 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DffbO54788 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DffbO54788 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DffbO54788 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DffbO54788 Peli2-204ENSMUST00000226513 1320 ntBASIC21.16■□□□□ 0.98
DffbO54788 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
DffbO54788 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
DffbO54788 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DffbO54788 Gm8109-201ENSMUST00000194076 746 ntBASIC21.15■□□□□ 0.98
DffbO54788 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DffbO54788 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DffbO54788 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DffbO54788 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DffbO54788 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DffbO54788 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DffbO54788 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.12■□□□□ 0.97
DffbO54788 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DffbO54788 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DffbO54788 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DffbO54788 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.11■□□□□ 0.97
DffbO54788 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms