Protein–RNA interactions for Protein: E9Q7P2

Cacna1i, Voltage-dependent T-type calcium channel subunit alpha, mousemouse

Predictions only

Length 2,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1iE9Q7P2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cacna1iE9Q7P2 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cacna1iE9Q7P2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1iE9Q7P2 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1iE9Q7P2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1iE9Q7P2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cacna1iE9Q7P2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacna1iE9Q7P2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cacna1iE9Q7P2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Cacna1iE9Q7P2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1iE9Q7P2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.85■□□□□ 0.93
Cacna1iE9Q7P2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cacna1iE9Q7P2 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC20.85■□□□□ 0.93
Cacna1iE9Q7P2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cacna1iE9Q7P2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cacna1iE9Q7P2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Cacna1iE9Q7P2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.82■□□□□ 0.92
Cacna1iE9Q7P2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1iE9Q7P2 Gm9397-201ENSMUST00000200125 605 ntBASIC20.82■□□□□ 0.92
Cacna1iE9Q7P2 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cacna1iE9Q7P2 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.82■□□□□ 0.92
Cacna1iE9Q7P2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cacna1iE9Q7P2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1iE9Q7P2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cacna1iE9Q7P2 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Cacna1iE9Q7P2 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cacna1iE9Q7P2 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1iE9Q7P2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1iE9Q7P2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cacna1iE9Q7P2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cacna1iE9Q7P2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.78■□□□□ 0.92
Cacna1iE9Q7P2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.78■□□□□ 0.92
Cacna1iE9Q7P2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cacna1iE9Q7P2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.77■□□□□ 0.92
Cacna1iE9Q7P2 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Cacna1iE9Q7P2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Cacna1iE9Q7P2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Cacna1iE9Q7P2 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cacna1iE9Q7P2 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1iE9Q7P2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Cacna1iE9Q7P2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Cacna1iE9Q7P2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1iE9Q7P2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1iE9Q7P2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cacna1iE9Q7P2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.71■□□□□ 0.91
Cacna1iE9Q7P2 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1iE9Q7P2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1iE9Q7P2 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cacna1iE9Q7P2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.7■□□□□ 0.9
Cacna1iE9Q7P2 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1iE9Q7P2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.69■□□□□ 0.9
Cacna1iE9Q7P2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cacna1iE9Q7P2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cacna1iE9Q7P2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Cacna1iE9Q7P2 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1iE9Q7P2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cacna1iE9Q7P2 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.67■□□□□ 0.9
Cacna1iE9Q7P2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cacna1iE9Q7P2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Cacna1iE9Q7P2 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cacna1iE9Q7P2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.63■□□□□ 0.89
Cacna1iE9Q7P2 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.62■□□□□ 0.89
Cacna1iE9Q7P2 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Cacna1iE9Q7P2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.62■□□□□ 0.89
Cacna1iE9Q7P2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.62■□□□□ 0.89
Cacna1iE9Q7P2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cacna1iE9Q7P2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cacna1iE9Q7P2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1iE9Q7P2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cacna1iE9Q7P2 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cacna1iE9Q7P2 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1iE9Q7P2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1iE9Q7P2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1iE9Q7P2 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cacna1iE9Q7P2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cacna1iE9Q7P2 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1iE9Q7P2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cacna1iE9Q7P2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.55■□□□□ 0.88
Cacna1iE9Q7P2 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1iE9Q7P2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cacna1iE9Q7P2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1iE9Q7P2 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1iE9Q7P2 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.54■□□□□ 0.88
Cacna1iE9Q7P2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cacna1iE9Q7P2 Gm8503-201ENSMUST00000118131 455 ntBASIC20.53■□□□□ 0.88
Cacna1iE9Q7P2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.51■□□□□ 0.87
Cacna1iE9Q7P2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cacna1iE9Q7P2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.51■□□□□ 0.87
Cacna1iE9Q7P2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1iE9Q7P2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1iE9Q7P2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1iE9Q7P2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
Cacna1iE9Q7P2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1iE9Q7P2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1iE9Q7P2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1iE9Q7P2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1iE9Q7P2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1iE9Q7P2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1iE9Q7P2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Cacna1iE9Q7P2 Gm24970-201ENSMUST00000175582 82 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms