Protein–RNA interactions for Protein: B2RQC6

Cad, CAD protein, mousemouse

Predictions only

Length 2,225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CadB2RQC6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CadB2RQC6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CadB2RQC6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.65■■□□□ 1.06
CadB2RQC6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CadB2RQC6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CadB2RQC6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CadB2RQC6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.65■■□□□ 1.06
CadB2RQC6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CadB2RQC6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CadB2RQC6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CadB2RQC6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CadB2RQC6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CadB2RQC6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CadB2RQC6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.62■■□□□ 1.05
CadB2RQC6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CadB2RQC6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CadB2RQC6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CadB2RQC6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CadB2RQC6 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.59■■□□□ 1.05
CadB2RQC6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CadB2RQC6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CadB2RQC6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CadB2RQC6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
CadB2RQC6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CadB2RQC6 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CadB2RQC6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CadB2RQC6 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CadB2RQC6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CadB2RQC6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CadB2RQC6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CadB2RQC6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.53■■□□□ 1.04
CadB2RQC6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CadB2RQC6 Gm24970-201ENSMUST00000175582 82 ntBASIC21.52■■□□□ 1.04
CadB2RQC6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CadB2RQC6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CadB2RQC6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CadB2RQC6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.5■■□□□ 1.03
CadB2RQC6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CadB2RQC6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.49■■□□□ 1.03
CadB2RQC6 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CadB2RQC6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CadB2RQC6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CadB2RQC6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CadB2RQC6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.46■■□□□ 1.03
CadB2RQC6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.44■■□□□ 1.02
CadB2RQC6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CadB2RQC6 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.43■■□□□ 1.02
CadB2RQC6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CadB2RQC6 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.43■■□□□ 1.02
CadB2RQC6 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CadB2RQC6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CadB2RQC6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CadB2RQC6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CadB2RQC6 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.38■■□□□ 1.01
CadB2RQC6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CadB2RQC6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.36■■□□□ 1.01
CadB2RQC6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CadB2RQC6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.36■■□□□ 1.01
CadB2RQC6 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CadB2RQC6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.36■■□□□ 1.01
CadB2RQC6 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.35■■□□□ 1.01
CadB2RQC6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CadB2RQC6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CadB2RQC6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.32■■□□□ 1
CadB2RQC6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.31■■□□□ 1
CadB2RQC6 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.31■■□□□ 1
CadB2RQC6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CadB2RQC6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CadB2RQC6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CadB2RQC6 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.3■■□□□ 1
CadB2RQC6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CadB2RQC6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CadB2RQC6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CadB2RQC6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CadB2RQC6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.28■■□□□ 1
CadB2RQC6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.28■■□□□ 1
CadB2RQC6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.28■■□□□ 1
CadB2RQC6 Gm8503-201ENSMUST00000118131 455 ntBASIC21.26■□□□□ 0.99
CadB2RQC6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CadB2RQC6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CadB2RQC6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CadB2RQC6 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.24■□□□□ 0.99
CadB2RQC6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CadB2RQC6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CadB2RQC6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CadB2RQC6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CadB2RQC6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CadB2RQC6 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CadB2RQC6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.21■□□□□ 0.99
CadB2RQC6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CadB2RQC6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CadB2RQC6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.2■□□□□ 0.98
CadB2RQC6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CadB2RQC6 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CadB2RQC6 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.19■□□□□ 0.98
CadB2RQC6 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.19■□□□□ 0.98
CadB2RQC6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
CadB2RQC6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CadB2RQC6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CadB2RQC6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms