Protein–RNA interactions for Protein: A9Z055

H2al2b, Histone H2A, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al2bA9Z055 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
H2al2bA9Z055 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
H2al2bA9Z055 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2al2bA9Z055 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2al2bA9Z055 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H2al2bA9Z055 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
H2al2bA9Z055 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
H2al2bA9Z055 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
H2al2bA9Z055 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
H2al2bA9Z055 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
H2al2bA9Z055 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
H2al2bA9Z055 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2al2bA9Z055 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2al2bA9Z055 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2al2bA9Z055 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
H2al2bA9Z055 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
H2al2bA9Z055 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.59■□□□□ 0.57
H2al2bA9Z055 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2al2bA9Z055 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
H2al2bA9Z055 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
H2al2bA9Z055 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
H2al2bA9Z055 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2al2bA9Z055 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
H2al2bA9Z055 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
H2al2bA9Z055 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
H2al2bA9Z055 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
H2al2bA9Z055 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
H2al2bA9Z055 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
H2al2bA9Z055 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
H2al2bA9Z055 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
H2al2bA9Z055 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
H2al2bA9Z055 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
H2al2bA9Z055 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC18.5■□□□□ 0.55
H2al2bA9Z055 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
H2al2bA9Z055 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
H2al2bA9Z055 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
H2al2bA9Z055 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
H2al2bA9Z055 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
H2al2bA9Z055 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2al2bA9Z055 Amer2-203ENSMUST00000225247 2662 ntBASIC18.48■□□□□ 0.55
H2al2bA9Z055 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
H2al2bA9Z055 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
H2al2bA9Z055 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
H2al2bA9Z055 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC18.46■□□□□ 0.55
H2al2bA9Z055 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
H2al2bA9Z055 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H2al2bA9Z055 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
H2al2bA9Z055 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
H2al2bA9Z055 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2al2bA9Z055 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2al2bA9Z055 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
H2al2bA9Z055 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
H2al2bA9Z055 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
H2al2bA9Z055 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.43■□□□□ 0.54
H2al2bA9Z055 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
H2al2bA9Z055 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2al2bA9Z055 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
H2al2bA9Z055 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
H2al2bA9Z055 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
H2al2bA9Z055 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
H2al2bA9Z055 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
H2al2bA9Z055 Gm25262-201ENSMUST00000174934 133 ntBASIC18.41■□□□□ 0.54
H2al2bA9Z055 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.4■□□□□ 0.54
H2al2bA9Z055 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
H2al2bA9Z055 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.39■□□□□ 0.53
H2al2bA9Z055 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
H2al2bA9Z055 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
H2al2bA9Z055 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2al2bA9Z055 AC166822.3-201ENSMUST00000227394 661 ntBASIC18.38■□□□□ 0.53
H2al2bA9Z055 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
H2al2bA9Z055 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2al2bA9Z055 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2al2bA9Z055 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
H2al2bA9Z055 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.37■□□□□ 0.53
H2al2bA9Z055 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.36■□□□□ 0.53
H2al2bA9Z055 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC18.36■□□□□ 0.53
H2al2bA9Z055 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
H2al2bA9Z055 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
H2al2bA9Z055 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
H2al2bA9Z055 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
H2al2bA9Z055 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H2al2bA9Z055 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
H2al2bA9Z055 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC18.34■□□□□ 0.53
H2al2bA9Z055 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2al2bA9Z055 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H2al2bA9Z055 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
H2al2bA9Z055 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
H2al2bA9Z055 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.33■□□□□ 0.52
H2al2bA9Z055 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
H2al2bA9Z055 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC18.32■□□□□ 0.52
H2al2bA9Z055 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2al2bA9Z055 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
H2al2bA9Z055 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC18.31■□□□□ 0.52
H2al2bA9Z055 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
H2al2bA9Z055 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2al2bA9Z055 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2al2bA9Z055 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2al2bA9Z055 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2al2bA9Z055 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2al2bA9Z055 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms