Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
Gm28729A0A1B0GSW2 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Gm28729A0A1B0GSW2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC25.5■■□□□ 1.67
Gm28729A0A1B0GSW2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Gm28729A0A1B0GSW2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Gm28729A0A1B0GSW2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Gm28729A0A1B0GSW2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Gm28729A0A1B0GSW2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.47■■□□□ 1.67
Gm28729A0A1B0GSW2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Gm28729A0A1B0GSW2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.46■■□□□ 1.67
Gm28729A0A1B0GSW2 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Gm28729A0A1B0GSW2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Gm28729A0A1B0GSW2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Gm28729A0A1B0GSW2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Gm28729A0A1B0GSW2 Gm24970-201ENSMUST00000175582 82 ntBASIC25.42■■□□□ 1.66
Gm28729A0A1B0GSW2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Gm28729A0A1B0GSW2 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.41■■□□□ 1.66
Gm28729A0A1B0GSW2 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Gm28729A0A1B0GSW2 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Gm28729A0A1B0GSW2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Gm28729A0A1B0GSW2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
Gm28729A0A1B0GSW2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC25.38■■□□□ 1.65
Gm28729A0A1B0GSW2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.36■■□□□ 1.65
Gm28729A0A1B0GSW2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Gm28729A0A1B0GSW2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Gm28729A0A1B0GSW2 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Gm28729A0A1B0GSW2 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Gm28729A0A1B0GSW2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Gm28729A0A1B0GSW2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Gm28729A0A1B0GSW2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Gm28729A0A1B0GSW2 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Gm28729A0A1B0GSW2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Gm28729A0A1B0GSW2 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Gm28729A0A1B0GSW2 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Gm28729A0A1B0GSW2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Gm28729A0A1B0GSW2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Gm28729A0A1B0GSW2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Gm28729A0A1B0GSW2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Gm28729A0A1B0GSW2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.27■■□□□ 1.64
Gm28729A0A1B0GSW2 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Gm28729A0A1B0GSW2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gm28729A0A1B0GSW2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
Gm28729A0A1B0GSW2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Gm28729A0A1B0GSW2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
Gm28729A0A1B0GSW2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Gm28729A0A1B0GSW2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
Gm28729A0A1B0GSW2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.23■■□□□ 1.63
Gm28729A0A1B0GSW2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.21■■□□□ 1.63
Gm28729A0A1B0GSW2 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.21■■□□□ 1.63
Gm28729A0A1B0GSW2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Gm28729A0A1B0GSW2 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.2■■□□□ 1.62
Gm28729A0A1B0GSW2 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Gm28729A0A1B0GSW2 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Gm28729A0A1B0GSW2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Gm28729A0A1B0GSW2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
Gm28729A0A1B0GSW2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Gm28729A0A1B0GSW2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.15■■□□□ 1.62
Gm28729A0A1B0GSW2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Gm28729A0A1B0GSW2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Gm28729A0A1B0GSW2 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Gm28729A0A1B0GSW2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Gm28729A0A1B0GSW2 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Gm28729A0A1B0GSW2 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Gm28729A0A1B0GSW2 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.09■■□□□ 1.61
Gm28729A0A1B0GSW2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.08■■□□□ 1.61
Gm28729A0A1B0GSW2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
Gm28729A0A1B0GSW2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC25.07■■□□□ 1.6
Gm28729A0A1B0GSW2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gm28729A0A1B0GSW2 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Gm28729A0A1B0GSW2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Gm28729A0A1B0GSW2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.06■■□□□ 1.6
Gm28729A0A1B0GSW2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Gm28729A0A1B0GSW2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Gm28729A0A1B0GSW2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Gm28729A0A1B0GSW2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Gm28729A0A1B0GSW2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Gm28729A0A1B0GSW2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Gm28729A0A1B0GSW2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Gm28729A0A1B0GSW2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Gm28729A0A1B0GSW2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Gm28729A0A1B0GSW2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Gm28729A0A1B0GSW2 AC157572.2-201ENSMUST00000226970 908 ntBASIC25.01■■□□□ 1.59
Gm28729A0A1B0GSW2 Gm30346-201ENSMUST00000218641 1699 ntBASIC25.01■■□□□ 1.59
Gm28729A0A1B0GSW2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
Gm28729A0A1B0GSW2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
Gm28729A0A1B0GSW2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC24.98■■□□□ 1.59
Gm28729A0A1B0GSW2 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.98■■□□□ 1.59
Gm28729A0A1B0GSW2 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Gm28729A0A1B0GSW2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Gm28729A0A1B0GSW2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Gm28729A0A1B0GSW2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Gm28729A0A1B0GSW2 Gm8503-201ENSMUST00000118131 455 ntBASIC24.92■■□□□ 1.58
Gm28729A0A1B0GSW2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Gm28729A0A1B0GSW2 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Gm28729A0A1B0GSW2 Gm6821-201ENSMUST00000107540 542 ntBASIC24.91■■□□□ 1.58
Gm28729A0A1B0GSW2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC24.91■■□□□ 1.58
Gm28729A0A1B0GSW2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Gm28729A0A1B0GSW2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
Gm28729A0A1B0GSW2 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Gm28729A0A1B0GSW2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms