Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv17A0A140T8P8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv17A0A140T8P8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv17A0A140T8P8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.14■□□□□ 0.65
Trbv17A0A140T8P8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv17A0A140T8P8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv17A0A140T8P8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv17A0A140T8P8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv17A0A140T8P8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trbv17A0A140T8P8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trbv17A0A140T8P8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv17A0A140T8P8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv17A0A140T8P8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trbv17A0A140T8P8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Trbv17A0A140T8P8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv17A0A140T8P8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.1■□□□□ 0.65
Trbv17A0A140T8P8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Trbv17A0A140T8P8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trbv17A0A140T8P8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
Trbv17A0A140T8P8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv17A0A140T8P8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv17A0A140T8P8 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.09■□□□□ 0.65
Trbv17A0A140T8P8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv17A0A140T8P8 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trbv17A0A140T8P8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trbv17A0A140T8P8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.06■□□□□ 0.64
Trbv17A0A140T8P8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trbv17A0A140T8P8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Trbv17A0A140T8P8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trbv17A0A140T8P8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.04■□□□□ 0.64
Trbv17A0A140T8P8 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trbv17A0A140T8P8 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.03■□□□□ 0.64
Trbv17A0A140T8P8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv17A0A140T8P8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trbv17A0A140T8P8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv17A0A140T8P8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv17A0A140T8P8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trbv17A0A140T8P8 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19■□□□□ 0.63
Trbv17A0A140T8P8 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Trbv17A0A140T8P8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trbv17A0A140T8P8 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv17A0A140T8P8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trbv17A0A140T8P8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.99■□□□□ 0.63
Trbv17A0A140T8P8 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Trbv17A0A140T8P8 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv17A0A140T8P8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv17A0A140T8P8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv17A0A140T8P8 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Trbv17A0A140T8P8 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbv17A0A140T8P8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv17A0A140T8P8 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv17A0A140T8P8 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trbv17A0A140T8P8 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Trbv17A0A140T8P8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Trbv17A0A140T8P8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv17A0A140T8P8 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv17A0A140T8P8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbv17A0A140T8P8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Trbv17A0A140T8P8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Trbv17A0A140T8P8 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Trbv17A0A140T8P8 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv17A0A140T8P8 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbv17A0A140T8P8 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbv17A0A140T8P8 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Trbv17A0A140T8P8 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv17A0A140T8P8 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trbv17A0A140T8P8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv17A0A140T8P8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Trbv17A0A140T8P8 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbv17A0A140T8P8 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.87■□□□□ 0.61
Trbv17A0A140T8P8 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.87■□□□□ 0.61
Trbv17A0A140T8P8 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Trbv17A0A140T8P8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv17A0A140T8P8 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv17A0A140T8P8 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbv17A0A140T8P8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbv17A0A140T8P8 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.85■□□□□ 0.61
Trbv17A0A140T8P8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv17A0A140T8P8 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv17A0A140T8P8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trbv17A0A140T8P8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trbv17A0A140T8P8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trbv17A0A140T8P8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv17A0A140T8P8 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trbv17A0A140T8P8 Zfp131-205ENSMUST00000223812 663 ntBASIC18.82■□□□□ 0.6
Trbv17A0A140T8P8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trbv17A0A140T8P8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Trbv17A0A140T8P8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv17A0A140T8P8 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv17A0A140T8P8 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trbv17A0A140T8P8 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv17A0A140T8P8 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trbv17A0A140T8P8 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv17A0A140T8P8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trbv17A0A140T8P8 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.8■□□□□ 0.6
Trbv17A0A140T8P8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trbv17A0A140T8P8 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC18.79■□□□□ 0.6
Trbv17A0A140T8P8 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trbv17A0A140T8P8 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trbv17A0A140T8P8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms