Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trav7-1A0A0G2JEV5 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav7-1A0A0G2JEV5 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav7-1A0A0G2JEV5 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav7-1A0A0G2JEV5 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.37■□□□□ 0.69
Trav7-1A0A0G2JEV5 Amer2-203ENSMUST00000225247 2662 ntBASIC19.37■□□□□ 0.69
Trav7-1A0A0G2JEV5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav7-1A0A0G2JEV5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.36■□□□□ 0.69
Trav7-1A0A0G2JEV5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
Trav7-1A0A0G2JEV5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav7-1A0A0G2JEV5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav7-1A0A0G2JEV5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav7-1A0A0G2JEV5 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Trav7-1A0A0G2JEV5 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav7-1A0A0G2JEV5 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav7-1A0A0G2JEV5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav7-1A0A0G2JEV5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav7-1A0A0G2JEV5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav7-1A0A0G2JEV5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav7-1A0A0G2JEV5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav7-1A0A0G2JEV5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav7-1A0A0G2JEV5 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav7-1A0A0G2JEV5 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Trav7-1A0A0G2JEV5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trav7-1A0A0G2JEV5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav7-1A0A0G2JEV5 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC19.28■□□□□ 0.68
Trav7-1A0A0G2JEV5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7-1A0A0G2JEV5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7-1A0A0G2JEV5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav7-1A0A0G2JEV5 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Trav7-1A0A0G2JEV5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav7-1A0A0G2JEV5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trav7-1A0A0G2JEV5 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Trav7-1A0A0G2JEV5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trav7-1A0A0G2JEV5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav7-1A0A0G2JEV5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav7-1A0A0G2JEV5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav7-1A0A0G2JEV5 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav7-1A0A0G2JEV5 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav7-1A0A0G2JEV5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav7-1A0A0G2JEV5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav7-1A0A0G2JEV5 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav7-1A0A0G2JEV5 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav7-1A0A0G2JEV5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav7-1A0A0G2JEV5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.22■□□□□ 0.67
Trav7-1A0A0G2JEV5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Trav7-1A0A0G2JEV5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav7-1A0A0G2JEV5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav7-1A0A0G2JEV5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trav7-1A0A0G2JEV5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav7-1A0A0G2JEV5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav7-1A0A0G2JEV5 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav7-1A0A0G2JEV5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19.18■□□□□ 0.66
Trav7-1A0A0G2JEV5 Gm30346-201ENSMUST00000218641 1699 ntBASIC19.18■□□□□ 0.66
Trav7-1A0A0G2JEV5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.18■□□□□ 0.66
Trav7-1A0A0G2JEV5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav7-1A0A0G2JEV5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trav7-1A0A0G2JEV5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trav7-1A0A0G2JEV5 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav7-1A0A0G2JEV5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav7-1A0A0G2JEV5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trav7-1A0A0G2JEV5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.13■□□□□ 0.65
Trav7-1A0A0G2JEV5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav7-1A0A0G2JEV5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav7-1A0A0G2JEV5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav7-1A0A0G2JEV5 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav7-1A0A0G2JEV5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC19.12■□□□□ 0.65
Trav7-1A0A0G2JEV5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.11■□□□□ 0.65
Trav7-1A0A0G2JEV5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav7-1A0A0G2JEV5 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.1■□□□□ 0.65
Trav7-1A0A0G2JEV5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav7-1A0A0G2JEV5 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav7-1A0A0G2JEV5 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav7-1A0A0G2JEV5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav7-1A0A0G2JEV5 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Trav7-1A0A0G2JEV5 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Trav7-1A0A0G2JEV5 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav7-1A0A0G2JEV5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav7-1A0A0G2JEV5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Trav7-1A0A0G2JEV5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav7-1A0A0G2JEV5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav7-1A0A0G2JEV5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.05■□□□□ 0.64
Trav7-1A0A0G2JEV5 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav7-1A0A0G2JEV5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav7-1A0A0G2JEV5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav7-1A0A0G2JEV5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav7-1A0A0G2JEV5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav7-1A0A0G2JEV5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7-1A0A0G2JEV5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav7-1A0A0G2JEV5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav7-1A0A0G2JEV5 Peli2-204ENSMUST00000226513 1320 ntBASIC19.01■□□□□ 0.63
Trav7-1A0A0G2JEV5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trav7-1A0A0G2JEV5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav7-1A0A0G2JEV5 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Trav7-1A0A0G2JEV5 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav7-1A0A0G2JEV5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav7-1A0A0G2JEV5 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19■□□□□ 0.63
Trav7-1A0A0G2JEV5 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav7-1A0A0G2JEV5 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav7-1A0A0G2JEV5 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms