Protein–RNA interactions for Protein: A0A0A6YW26

Ighv8-4, Immunoglobulin heavy variable V8-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-4A0A0A6YW26 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv8-4A0A0A6YW26 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv8-4A0A0A6YW26 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
Ighv8-4A0A0A6YW26 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv8-4A0A0A6YW26 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv8-4A0A0A6YW26 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv8-4A0A0A6YW26 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv8-4A0A0A6YW26 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv8-4A0A0A6YW26 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Ighv8-4A0A0A6YW26 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv8-4A0A0A6YW26 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv8-4A0A0A6YW26 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv8-4A0A0A6YW26 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.9■□□□□ 0.62
Ighv8-4A0A0A6YW26 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv8-4A0A0A6YW26 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Ighv8-4A0A0A6YW26 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv8-4A0A0A6YW26 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv8-4A0A0A6YW26 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv8-4A0A0A6YW26 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv8-4A0A0A6YW26 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.88■□□□□ 0.61
Ighv8-4A0A0A6YW26 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv8-4A0A0A6YW26 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv8-4A0A0A6YW26 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Ighv8-4A0A0A6YW26 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
Ighv8-4A0A0A6YW26 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv8-4A0A0A6YW26 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv8-4A0A0A6YW26 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv8-4A0A0A6YW26 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv8-4A0A0A6YW26 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv8-4A0A0A6YW26 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv8-4A0A0A6YW26 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv8-4A0A0A6YW26 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv8-4A0A0A6YW26 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv8-4A0A0A6YW26 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv8-4A0A0A6YW26 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ighv8-4A0A0A6YW26 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv8-4A0A0A6YW26 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ighv8-4A0A0A6YW26 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv8-4A0A0A6YW26 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv8-4A0A0A6YW26 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv8-4A0A0A6YW26 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv8-4A0A0A6YW26 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv8-4A0A0A6YW26 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv8-4A0A0A6YW26 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ighv8-4A0A0A6YW26 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv8-4A0A0A6YW26 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv8-4A0A0A6YW26 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv8-4A0A0A6YW26 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv8-4A0A0A6YW26 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Ighv8-4A0A0A6YW26 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv8-4A0A0A6YW26 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv8-4A0A0A6YW26 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv8-4A0A0A6YW26 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv8-4A0A0A6YW26 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv8-4A0A0A6YW26 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv8-4A0A0A6YW26 Zfp131-205ENSMUST00000223812 663 ntBASIC18.75■□□□□ 0.59
Ighv8-4A0A0A6YW26 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv8-4A0A0A6YW26 Gm16148-201ENSMUST00000119653 893 ntBASIC18.73■□□□□ 0.59
Ighv8-4A0A0A6YW26 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv8-4A0A0A6YW26 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv8-4A0A0A6YW26 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv8-4A0A0A6YW26 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Ighv8-4A0A0A6YW26 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv8-4A0A0A6YW26 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv8-4A0A0A6YW26 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.71■□□□□ 0.59
Ighv8-4A0A0A6YW26 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv8-4A0A0A6YW26 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.71■□□□□ 0.59
Ighv8-4A0A0A6YW26 Peli2-204ENSMUST00000226513 1320 ntBASIC18.71■□□□□ 0.59
Ighv8-4A0A0A6YW26 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv8-4A0A0A6YW26 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.7■□□□□ 0.58
Ighv8-4A0A0A6YW26 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv8-4A0A0A6YW26 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ighv8-4A0A0A6YW26 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv8-4A0A0A6YW26 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv8-4A0A0A6YW26 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ighv8-4A0A0A6YW26 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv8-4A0A0A6YW26 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ighv8-4A0A0A6YW26 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv8-4A0A0A6YW26 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ighv8-4A0A0A6YW26 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv8-4A0A0A6YW26 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv8-4A0A0A6YW26 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.65■□□□□ 0.58
Ighv8-4A0A0A6YW26 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv8-4A0A0A6YW26 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Ighv8-4A0A0A6YW26 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv8-4A0A0A6YW26 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Ighv8-4A0A0A6YW26 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.63■□□□□ 0.57
Ighv8-4A0A0A6YW26 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv8-4A0A0A6YW26 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Ighv8-4A0A0A6YW26 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv8-4A0A0A6YW26 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Ighv8-4A0A0A6YW26 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv8-4A0A0A6YW26 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv8-4A0A0A6YW26 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ighv8-4A0A0A6YW26 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv8-4A0A0A6YW26 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv8-4A0A0A6YW26 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.58■□□□□ 0.57
Ighv8-4A0A0A6YW26 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv8-4A0A0A6YW26 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ighv8-4A0A0A6YW26 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms