Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 AA386476-201ENSMUST00000098781 1665 ntBASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
H2afb1S4R1E0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb1S4R1E0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb1S4R1E0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.33■□□□□ 0.37
H2afb1S4R1E0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb1S4R1E0 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb1S4R1E0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb1S4R1E0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
H2afb1S4R1E0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.33■□□□□ 0.36
H2afb1S4R1E0 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.33■□□□□ 0.36
H2afb1S4R1E0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb1S4R1E0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb1S4R1E0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb1S4R1E0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb1S4R1E0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
H2afb1S4R1E0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
H2afb1S4R1E0 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb1S4R1E0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb1S4R1E0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H2afb1S4R1E0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb1S4R1E0 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb1S4R1E0 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb1S4R1E0 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.27■□□□□ 0.36
H2afb1S4R1E0 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
H2afb1S4R1E0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
H2afb1S4R1E0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
H2afb1S4R1E0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms