Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a4Q9QZR9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a4Q9QZR9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a4Q9QZR9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Col4a4Q9QZR9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.66■□□□□ 0.74
Col4a4Q9QZR9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Col4a4Q9QZR9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Col4a4Q9QZR9 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a4Q9QZR9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.64■□□□□ 0.73
Col4a4Q9QZR9 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a4Q9QZR9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a4Q9QZR9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a4Q9QZR9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Col4a4Q9QZR9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Col4a4Q9QZR9 Gm5417-201ENSMUST00000079706 384 ntBASIC19.64■□□□□ 0.73
Col4a4Q9QZR9 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Col4a4Q9QZR9 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.64■□□□□ 0.73
Col4a4Q9QZR9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a4Q9QZR9 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.63■□□□□ 0.73
Col4a4Q9QZR9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.63■□□□□ 0.73
Col4a4Q9QZR9 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC19.63■□□□□ 0.73
Col4a4Q9QZR9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.63■□□□□ 0.73
Col4a4Q9QZR9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a4Q9QZR9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Col4a4Q9QZR9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Col4a4Q9QZR9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a4Q9QZR9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a4Q9QZR9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Col4a4Q9QZR9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a4Q9QZR9 Gm6433-201ENSMUST00000118634 875 ntBASIC19.61■□□□□ 0.73
Col4a4Q9QZR9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.61■□□□□ 0.73
Col4a4Q9QZR9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a4Q9QZR9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.61■□□□□ 0.73
Col4a4Q9QZR9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Col4a4Q9QZR9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Col4a4Q9QZR9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a4Q9QZR9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a4Q9QZR9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a4Q9QZR9 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC19.6■□□□□ 0.73
Col4a4Q9QZR9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Col4a4Q9QZR9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Col4a4Q9QZR9 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Col4a4Q9QZR9 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.6■□□□□ 0.73
Col4a4Q9QZR9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Col4a4Q9QZR9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Col4a4Q9QZR9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a4Q9QZR9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a4Q9QZR9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a4Q9QZR9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a4Q9QZR9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a4Q9QZR9 Gm7367-201ENSMUST00000057611 492 ntBASIC19.58■□□□□ 0.72
Col4a4Q9QZR9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a4Q9QZR9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.58■□□□□ 0.72
Col4a4Q9QZR9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Col4a4Q9QZR9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a4Q9QZR9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a4Q9QZR9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Col4a4Q9QZR9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a4Q9QZR9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Col4a4Q9QZR9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Col4a4Q9QZR9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Col4a4Q9QZR9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms