Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Mbd3l1Q9D9H3 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Mbd3l1Q9D9H3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.66■□□□□ 0.26
Mbd3l1Q9D9H3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.66■□□□□ 0.26
Mbd3l1Q9D9H3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mbd3l1Q9D9H3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mbd3l1Q9D9H3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Mbd3l1Q9D9H3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Mbd3l1Q9D9H3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Mir3960-201ENSMUST00000198213 73 ntBASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Mbd3l1Q9D9H3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Mbd3l1Q9D9H3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mbd3l1Q9D9H3 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.64■□□□□ 0.25
Mbd3l1Q9D9H3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mbd3l1Q9D9H3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mbd3l1Q9D9H3 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Mbd3l1Q9D9H3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mbd3l1Q9D9H3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Mbd3l1Q9D9H3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.63■□□□□ 0.25
Mbd3l1Q9D9H3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Mbd3l1Q9D9H3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mbd3l1Q9D9H3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Mbd3l1Q9D9H3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.61■□□□□ 0.25
Mbd3l1Q9D9H3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Mbd3l1Q9D9H3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mbd3l1Q9D9H3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mbd3l1Q9D9H3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mbd3l1Q9D9H3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.61■□□□□ 0.25
Mbd3l1Q9D9H3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Mbd3l1Q9D9H3 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Mbd3l1Q9D9H3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Gm44428-201ENSMUST00000204474 874 ntBASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Mbd3l1Q9D9H3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mbd3l1Q9D9H3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Mbd3l1Q9D9H3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mbd3l1Q9D9H3 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mbd3l1Q9D9H3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mbd3l1Q9D9H3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Mbd3l1Q9D9H3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Mbd3l1Q9D9H3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.59■□□□□ 0.25
Mbd3l1Q9D9H3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms