Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Scrt1Q99M85 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scrt1Q99M85 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scrt1Q99M85 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scrt1Q99M85 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.79■□□□□ 0.28
Scrt1Q99M85 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Scrt1Q99M85 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scrt1Q99M85 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.79■□□□□ 0.28
Scrt1Q99M85 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scrt1Q99M85 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scrt1Q99M85 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.79■□□□□ 0.28
Scrt1Q99M85 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Scrt1Q99M85 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Scrt1Q99M85 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Gm13148-201ENSMUST00000118892 745 ntBASIC16.78■□□□□ 0.28
Scrt1Q99M85 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Gm8520-201ENSMUST00000186517 868 ntBASIC16.78■□□□□ 0.28
Scrt1Q99M85 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.78■□□□□ 0.28
Scrt1Q99M85 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Scrt1Q99M85 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scrt1Q99M85 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scrt1Q99M85 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scrt1Q99M85 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scrt1Q99M85 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Scrt1Q99M85 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.77■□□□□ 0.28
Scrt1Q99M85 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scrt1Q99M85 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.77■□□□□ 0.28
Scrt1Q99M85 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Scrt1Q99M85 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scrt1Q99M85 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Scrt1Q99M85 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
Scrt1Q99M85 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scrt1Q99M85 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scrt1Q99M85 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scrt1Q99M85 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scrt1Q99M85 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Scrt1Q99M85 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Mir6236-201ENSMUST00000184437 123 ntBASIC16.76■□□□□ 0.27
Scrt1Q99M85 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scrt1Q99M85 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.76■□□□□ 0.27
Scrt1Q99M85 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scrt1Q99M85 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Scrt1Q99M85 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.75■□□□□ 0.27
Scrt1Q99M85 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.75■□□□□ 0.27
Scrt1Q99M85 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scrt1Q99M85 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Gm5408-201ENSMUST00000197998 747 ntBASIC16.74■□□□□ 0.27
Scrt1Q99M85 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scrt1Q99M85 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 117.5 ms