Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap3Q99LM2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap3Q99LM2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap3Q99LM2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap3Q99LM2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap3Q99LM2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap3Q99LM2 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.85■□□□□ 0.77
Cdk5rap3Q99LM2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.85■□□□□ 0.77
Cdk5rap3Q99LM2 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.85■□□□□ 0.77
Cdk5rap3Q99LM2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap3Q99LM2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap3Q99LM2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk5rap3Q99LM2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk5rap3Q99LM2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk5rap3Q99LM2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk5rap3Q99LM2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk5rap3Q99LM2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.83■□□□□ 0.77
Cdk5rap3Q99LM2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cdk5rap3Q99LM2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.83■□□□□ 0.76
Cdk5rap3Q99LM2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdk5rap3Q99LM2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cdk5rap3Q99LM2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap3Q99LM2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap3Q99LM2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap3Q99LM2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap3Q99LM2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cdk5rap3Q99LM2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap3Q99LM2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cdk5rap3Q99LM2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cdk5rap3Q99LM2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap3Q99LM2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap3Q99LM2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap3Q99LM2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk5rap3Q99LM2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.79■□□□□ 0.76
Cdk5rap3Q99LM2 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk5rap3Q99LM2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk5rap3Q99LM2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk5rap3Q99LM2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk5rap3Q99LM2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk5rap3Q99LM2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk5rap3Q99LM2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk5rap3Q99LM2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cdk5rap3Q99LM2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap3Q99LM2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms