Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Gm9988-201ENSMUST00000069786 435 ntBASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ddx41Q91VN6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ddx41Q91VN6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.94■■□□□ 1.1
Ddx41Q91VN6 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx41Q91VN6 Gm27801-201ENSMUST00000184174 223 ntBASIC21.94■■□□□ 1.1
Ddx41Q91VN6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx41Q91VN6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx41Q91VN6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx41Q91VN6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx41Q91VN6 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.94■■□□□ 1.1
Ddx41Q91VN6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ddx41Q91VN6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx41Q91VN6 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
Ddx41Q91VN6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx41Q91VN6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.93■■□□□ 1.1
Ddx41Q91VN6 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.93■■□□□ 1.1
Ddx41Q91VN6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx41Q91VN6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx41Q91VN6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx41Q91VN6 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ddx41Q91VN6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.93■■□□□ 1.1
Ddx41Q91VN6 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.92■■□□□ 1.1
Ddx41Q91VN6 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Ddx41Q91VN6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ddx41Q91VN6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ddx41Q91VN6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx41Q91VN6 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx41Q91VN6 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.89■■□□□ 1.1
Ddx41Q91VN6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.1
Ddx41Q91VN6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ddx41Q91VN6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx41Q91VN6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx41Q91VN6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.89■■□□□ 1.09
Ddx41Q91VN6 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.89■■□□□ 1.09
Ddx41Q91VN6 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx41Q91VN6 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.89■■□□□ 1.09
Ddx41Q91VN6 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.89■■□□□ 1.09
Ddx41Q91VN6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ddx41Q91VN6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms