Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rpap2Q8VC34 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpap2Q8VC34 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpap2Q8VC34 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpap2Q8VC34 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.12■□□□□ 0.97
Rpap2Q8VC34 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rpap2Q8VC34 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.12■□□□□ 0.97
Rpap2Q8VC34 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpap2Q8VC34 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rpap2Q8VC34 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpap2Q8VC34 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rpap2Q8VC34 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpap2Q8VC34 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rpap2Q8VC34 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpap2Q8VC34 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.1■□□□□ 0.97
Rpap2Q8VC34 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpap2Q8VC34 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpap2Q8VC34 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpap2Q8VC34 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpap2Q8VC34 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.1■□□□□ 0.97
Rpap2Q8VC34 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rpap2Q8VC34 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rpap2Q8VC34 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rpap2Q8VC34 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC21.1■□□□□ 0.97
Rpap2Q8VC34 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rpap2Q8VC34 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpap2Q8VC34 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpap2Q8VC34 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpap2Q8VC34 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Rpap2Q8VC34 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rpap2Q8VC34 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpap2Q8VC34 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rpap2Q8VC34 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
Rpap2Q8VC34 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpap2Q8VC34 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Rpap2Q8VC34 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rpap2Q8VC34 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.08■□□□□ 0.97
Rpap2Q8VC34 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rpap2Q8VC34 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.08■□□□□ 0.97
Rpap2Q8VC34 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.08■□□□□ 0.97
Rpap2Q8VC34 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpap2Q8VC34 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Rpap2Q8VC34 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Rpap2Q8VC34 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
Rpap2Q8VC34 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Rpap2Q8VC34 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.08■□□□□ 0.96
Rpap2Q8VC34 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpap2Q8VC34 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpap2Q8VC34 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
Rpap2Q8VC34 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rpap2Q8VC34 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Rpap2Q8VC34 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rpap2Q8VC34 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rpap2Q8VC34 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Rpap2Q8VC34 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpap2Q8VC34 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpap2Q8VC34 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rpap2Q8VC34 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.05■□□□□ 0.96
Rpap2Q8VC34 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC21.05■□□□□ 0.96
Rpap2Q8VC34 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpap2Q8VC34 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpap2Q8VC34 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Rpap2Q8VC34 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpap2Q8VC34 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rpap2Q8VC34 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Rpap2Q8VC34 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpap2Q8VC34 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rpap2Q8VC34 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.04■□□□□ 0.96
Rpap2Q8VC34 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.03■□□□□ 0.96
Rpap2Q8VC34 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpap2Q8VC34 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpap2Q8VC34 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Rpap2Q8VC34 Gm7860-201ENSMUST00000121190 879 ntBASIC21.03■□□□□ 0.96
Rpap2Q8VC34 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpap2Q8VC34 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.03■□□□□ 0.96
Rpap2Q8VC34 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Rpap2Q8VC34 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Rpap2Q8VC34 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpap2Q8VC34 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rpap2Q8VC34 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpap2Q8VC34 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Rpap2Q8VC34 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms