Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smim4Q8C1Q6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Smim4Q8C1Q6 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim4Q8C1Q6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim4Q8C1Q6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim4Q8C1Q6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim4Q8C1Q6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim4Q8C1Q6 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim4Q8C1Q6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.06■□□□□ 0.16
Smim4Q8C1Q6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smim4Q8C1Q6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Smim4Q8C1Q6 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smim4Q8C1Q6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Gm9207-201ENSMUST00000198773 1115 ntBASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smim4Q8C1Q6 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smim4Q8C1Q6 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
Smim4Q8C1Q6 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smim4Q8C1Q6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smim4Q8C1Q6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smim4Q8C1Q6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smim4Q8C1Q6 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Smim4Q8C1Q6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC16.02■□□□□ 0.16
Smim4Q8C1Q6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smim4Q8C1Q6 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smim4Q8C1Q6 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.02■□□□□ 0.15
Smim4Q8C1Q6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smim4Q8C1Q6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smim4Q8C1Q6 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Smim4Q8C1Q6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smim4Q8C1Q6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC16■□□□□ 0.15
Smim4Q8C1Q6 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smim4Q8C1Q6 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms