Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cpsf7Q8BTV2 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.22■□□□□ 0.67
Cpsf7Q8BTV2 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.22■□□□□ 0.67
Cpsf7Q8BTV2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf7Q8BTV2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf7Q8BTV2 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.22■□□□□ 0.67
Cpsf7Q8BTV2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf7Q8BTV2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Cpsf7Q8BTV2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf7Q8BTV2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf7Q8BTV2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cpsf7Q8BTV2 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.21■□□□□ 0.67
Cpsf7Q8BTV2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.2■□□□□ 0.66
Cpsf7Q8BTV2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Grk6-206ENSMUST00000224995 2971 ntBASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cpsf7Q8BTV2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Rarb-207ENSMUST00000225921 2756 ntBASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cpsf7Q8BTV2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cpsf7Q8BTV2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cpsf7Q8BTV2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cpsf7Q8BTV2 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms