Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.3■□□□□ 0.52
VcanQ62059 Gm2559-201ENSMUST00000201323 363 ntBASIC18.3■□□□□ 0.52
VcanQ62059 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VcanQ62059 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VcanQ62059 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
VcanQ62059 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VcanQ62059 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.29■□□□□ 0.52
VcanQ62059 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
VcanQ62059 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.29■□□□□ 0.52
VcanQ62059 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VcanQ62059 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.29■□□□□ 0.52
VcanQ62059 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VcanQ62059 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VcanQ62059 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VcanQ62059 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VcanQ62059 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
VcanQ62059 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VcanQ62059 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
VcanQ62059 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VcanQ62059 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.28■□□□□ 0.52
VcanQ62059 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VcanQ62059 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VcanQ62059 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VcanQ62059 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VcanQ62059 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VcanQ62059 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VcanQ62059 Gm17971-201ENSMUST00000190239 806 ntBASIC18.28■□□□□ 0.52
VcanQ62059 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VcanQ62059 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.28■□□□□ 0.52
VcanQ62059 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VcanQ62059 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
VcanQ62059 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.27■□□□□ 0.52
VcanQ62059 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VcanQ62059 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.27■□□□□ 0.52
VcanQ62059 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.27■□□□□ 0.52
VcanQ62059 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
VcanQ62059 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VcanQ62059 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VcanQ62059 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
VcanQ62059 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.27■□□□□ 0.51
VcanQ62059 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.27■□□□□ 0.51
VcanQ62059 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VcanQ62059 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VcanQ62059 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VcanQ62059 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.26■□□□□ 0.51
VcanQ62059 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VcanQ62059 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VcanQ62059 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VcanQ62059 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VcanQ62059 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VcanQ62059 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VcanQ62059 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
VcanQ62059 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VcanQ62059 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VcanQ62059 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VcanQ62059 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VcanQ62059 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VcanQ62059 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VcanQ62059 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VcanQ62059 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VcanQ62059 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.25■□□□□ 0.51
VcanQ62059 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VcanQ62059 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VcanQ62059 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
VcanQ62059 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
VcanQ62059 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.25■□□□□ 0.51
VcanQ62059 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
VcanQ62059 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VcanQ62059 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VcanQ62059 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VcanQ62059 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VcanQ62059 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.24■□□□□ 0.51
VcanQ62059 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.24■□□□□ 0.51
VcanQ62059 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VcanQ62059 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VcanQ62059 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.24■□□□□ 0.51
VcanQ62059 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VcanQ62059 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.23■□□□□ 0.51
VcanQ62059 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VcanQ62059 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VcanQ62059 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VcanQ62059 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VcanQ62059 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
VcanQ62059 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
VcanQ62059 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VcanQ62059 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VcanQ62059 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
VcanQ62059 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.22■□□□□ 0.51
VcanQ62059 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
VcanQ62059 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VcanQ62059 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VcanQ62059 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
VcanQ62059 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
VcanQ62059 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VcanQ62059 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
VcanQ62059 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
VcanQ62059 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VcanQ62059 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
VcanQ62059 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms