Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.25■□□□□ 0.83
Znf235Q61116 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Znf235Q61116 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Znf235Q61116 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Znf235Q61116 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Znf235Q61116 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Znf235Q61116 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.25■□□□□ 0.83
Znf235Q61116 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Znf235Q61116 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Znf235Q61116 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.24■□□□□ 0.83
Znf235Q61116 Mir5133-201ENSMUST00000174955 77 ntBASIC20.24■□□□□ 0.83
Znf235Q61116 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.24■□□□□ 0.83
Znf235Q61116 Gm6365-201ENSMUST00000054711 744 ntBASIC20.24■□□□□ 0.83
Znf235Q61116 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Znf235Q61116 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Znf235Q61116 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.24■□□□□ 0.83
Znf235Q61116 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Znf235Q61116 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Znf235Q61116 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Znf235Q61116 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Znf235Q61116 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf235Q61116 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf235Q61116 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf235Q61116 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
Znf235Q61116 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf235Q61116 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Znf235Q61116 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Znf235Q61116 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Znf235Q61116 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Znf235Q61116 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Znf235Q61116 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Znf235Q61116 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Znf235Q61116 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Znf235Q61116 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Znf235Q61116 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Znf235Q61116 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Znf235Q61116 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Znf235Q61116 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Znf235Q61116 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Znf235Q61116 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.22■□□□□ 0.83
Znf235Q61116 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Znf235Q61116 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf235Q61116 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Znf235Q61116 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf235Q61116 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
Znf235Q61116 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf235Q61116 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Znf235Q61116 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Znf235Q61116 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Znf235Q61116 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Znf235Q61116 Gm7290-201ENSMUST00000104990 617 ntBASIC20.2■□□□□ 0.82
Znf235Q61116 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.2■□□□□ 0.82
Znf235Q61116 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Znf235Q61116 Gm12918-201ENSMUST00000120234 636 ntBASIC20.2■□□□□ 0.82
Znf235Q61116 Gm15710-201ENSMUST00000121821 636 ntBASIC20.2■□□□□ 0.82
Znf235Q61116 Gm5075-201ENSMUST00000196916 622 ntBASIC20.2■□□□□ 0.82
Znf235Q61116 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.2■□□□□ 0.82
Znf235Q61116 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.2■□□□□ 0.82
Znf235Q61116 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Znf235Q61116 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Znf235Q61116 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Znf235Q61116 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Znf235Q61116 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Znf235Q61116 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf235Q61116 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.19■□□□□ 0.82
Znf235Q61116 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf235Q61116 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf235Q61116 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Znf235Q61116 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf235Q61116 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf235Q61116 Gm27011-201ENSMUST00000182352 972 ntBASIC20.19■□□□□ 0.82
Znf235Q61116 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf235Q61116 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf235Q61116 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Znf235Q61116 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf235Q61116 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Znf235Q61116 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Znf235Q61116 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf235Q61116 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Znf235Q61116 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Znf235Q61116 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf235Q61116 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Znf235Q61116 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.18■□□□□ 0.82
Znf235Q61116 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf235Q61116 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.18■□□□□ 0.82
Znf235Q61116 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf235Q61116 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf235Q61116 Gm4968-201ENSMUST00000071458 858 ntBASIC20.18■□□□□ 0.82
Znf235Q61116 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Znf235Q61116 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Znf235Q61116 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf235Q61116 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Znf235Q61116 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf235Q61116 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Znf235Q61116 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Znf235Q61116 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf235Q61116 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf235Q61116 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Znf235Q61116 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.17■□□□□ 0.82
Znf235Q61116 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms