Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Thumpd3P97770 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Thumpd3P97770 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.47■□□□□ 0.71
Thumpd3P97770 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Thumpd3P97770 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Thumpd3P97770 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Thumpd3P97770 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Thumpd3P97770 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Thumpd3P97770 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.46■□□□□ 0.71
Thumpd3P97770 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.46■□□□□ 0.71
Thumpd3P97770 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.46■□□□□ 0.71
Thumpd3P97770 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Thumpd3P97770 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Thumpd3P97770 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.46■□□□□ 0.71
Thumpd3P97770 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Thumpd3P97770 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Thumpd3P97770 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Thumpd3P97770 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thumpd3P97770 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thumpd3P97770 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thumpd3P97770 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thumpd3P97770 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Thumpd3P97770 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thumpd3P97770 Gm43530-201ENSMUST00000195920 274 ntBASIC19.45■□□□□ 0.7
Thumpd3P97770 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.45■□□□□ 0.7
Thumpd3P97770 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thumpd3P97770 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.45■□□□□ 0.7
Thumpd3P97770 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thumpd3P97770 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thumpd3P97770 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Thumpd3P97770 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Thumpd3P97770 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.44■□□□□ 0.7
Thumpd3P97770 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Thumpd3P97770 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Thumpd3P97770 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Thumpd3P97770 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Thumpd3P97770 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Thumpd3P97770 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Thumpd3P97770 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Thumpd3P97770 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Thumpd3P97770 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Thumpd3P97770 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Thumpd3P97770 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Thumpd3P97770 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.43■□□□□ 0.7
Thumpd3P97770 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.43■□□□□ 0.7
Thumpd3P97770 Gm43137-201ENSMUST00000198052 594 ntBASIC19.43■□□□□ 0.7
Thumpd3P97770 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Thumpd3P97770 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Thumpd3P97770 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Thumpd3P97770 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.42■□□□□ 0.7
Thumpd3P97770 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thumpd3P97770 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thumpd3P97770 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thumpd3P97770 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thumpd3P97770 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thumpd3P97770 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Thumpd3P97770 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thumpd3P97770 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.42■□□□□ 0.7
Thumpd3P97770 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Thumpd3P97770 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thumpd3P97770 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Thumpd3P97770 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Thumpd3P97770 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thumpd3P97770 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Thumpd3P97770 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.41■□□□□ 0.7
Thumpd3P97770 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thumpd3P97770 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thumpd3P97770 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Thumpd3P97770 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thumpd3P97770 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Thumpd3P97770 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Thumpd3P97770 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Thumpd3P97770 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.4■□□□□ 0.7
Thumpd3P97770 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Thumpd3P97770 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Thumpd3P97770 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Thumpd3P97770 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Thumpd3P97770 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Thumpd3P97770 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Thumpd3P97770 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Thumpd3P97770 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Thumpd3P97770 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd3P97770 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.39■□□□□ 0.69
Thumpd3P97770 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.39■□□□□ 0.69
Thumpd3P97770 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd3P97770 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd3P97770 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd3P97770 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd3P97770 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd3P97770 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Thumpd3P97770 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Thumpd3P97770 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Thumpd3P97770 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd3P97770 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Thumpd3P97770 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Thumpd3P97770 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd3P97770 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Thumpd3P97770 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd3P97770 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Thumpd3P97770 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms