Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1aP97445 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cacna1aP97445 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1aP97445 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.76■□□□□ 0.43
Cacna1aP97445 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.76■□□□□ 0.43
Cacna1aP97445 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1aP97445 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.76■□□□□ 0.43
Cacna1aP97445 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cacna1aP97445 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1aP97445 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 Gm5643-201ENSMUST00000117081 966 ntBASIC17.75■□□□□ 0.43
Cacna1aP97445 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.75■□□□□ 0.43
Cacna1aP97445 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cacna1aP97445 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cacna1aP97445 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.75■□□□□ 0.43
Cacna1aP97445 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1aP97445 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.74■□□□□ 0.43
Cacna1aP97445 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1aP97445 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1aP97445 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cacna1aP97445 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1aP97445 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.74■□□□□ 0.43
Cacna1aP97445 Gm6576-201ENSMUST00000169678 883 ntBASIC17.74■□□□□ 0.43
Cacna1aP97445 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Cacna1aP97445 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cacna1aP97445 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.74■□□□□ 0.43
Cacna1aP97445 Dio3-201ENSMUST00000097228 1449 ntBASIC17.73■□□□□ 0.43
Cacna1aP97445 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1aP97445 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.73■□□□□ 0.43
Cacna1aP97445 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cacna1aP97445 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1aP97445 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1aP97445 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1aP97445 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1aP97445 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1aP97445 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cacna1aP97445 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1aP97445 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1aP97445 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cacna1aP97445 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1aP97445 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cacna1aP97445 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.72■□□□□ 0.43
Cacna1aP97445 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.72■□□□□ 0.43
Cacna1aP97445 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.72■□□□□ 0.43
Cacna1aP97445 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.72■□□□□ 0.43
Cacna1aP97445 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cacna1aP97445 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1aP97445 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.71■□□□□ 0.43
Cacna1aP97445 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1aP97445 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cacna1aP97445 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.71■□□□□ 0.43
Cacna1aP97445 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.71■□□□□ 0.43
Cacna1aP97445 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cacna1aP97445 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cacna1aP97445 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
Cacna1aP97445 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.71■□□□□ 0.42
Cacna1aP97445 Rab3c-203ENSMUST00000224180 967 ntBASIC17.71■□□□□ 0.42
Cacna1aP97445 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1aP97445 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cacna1aP97445 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1aP97445 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1aP97445 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1aP97445 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1aP97445 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.7■□□□□ 0.42
Cacna1aP97445 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1aP97445 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1aP97445 Gm21362-201ENSMUST00000194272 928 ntBASIC17.69■□□□□ 0.42
Cacna1aP97445 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1aP97445 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1aP97445 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1aP97445 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1aP97445 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1aP97445 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1aP97445 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1aP97445 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1aP97445 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1aP97445 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.68■□□□□ 0.42
Cacna1aP97445 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.68■□□□□ 0.42
Cacna1aP97445 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms