Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl9P51670 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Ccl9P51670 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl9P51670 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.78■□□□□ 0.28
Ccl9P51670 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl9P51670 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl9P51670 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Ccl9P51670 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl9P51670 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl9P51670 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccl9P51670 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.77■□□□□ 0.28
Ccl9P51670 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ccl9P51670 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ccl9P51670 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccl9P51670 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl9P51670 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl9P51670 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.77■□□□□ 0.27
Ccl9P51670 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC16.77■□□□□ 0.27
Ccl9P51670 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl9P51670 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl9P51670 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl9P51670 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccl9P51670 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ccl9P51670 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl9P51670 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl9P51670 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl9P51670 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.76■□□□□ 0.27
Ccl9P51670 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
Ccl9P51670 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl9P51670 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl9P51670 Gm21956-201ENSMUST00000179946 522 ntBASIC16.76■□□□□ 0.27
Ccl9P51670 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.76■□□□□ 0.27
Ccl9P51670 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl9P51670 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl9P51670 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccl9P51670 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl9P51670 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl9P51670 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl9P51670 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl9P51670 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl9P51670 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl9P51670 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl9P51670 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl9P51670 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ccl9P51670 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ccl9P51670 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Gm43137-201ENSMUST00000198052 594 ntBASIC16.74■□□□□ 0.27
Ccl9P51670 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccl9P51670 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.74■□□□□ 0.27
Ccl9P51670 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.74■□□□□ 0.27
Ccl9P51670 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccl9P51670 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ccl9P51670 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.74■□□□□ 0.27
Ccl9P51670 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ccl9P51670 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.73■□□□□ 0.27
Ccl9P51670 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.73■□□□□ 0.27
Ccl9P51670 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.73■□□□□ 0.27
Ccl9P51670 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ccl9P51670 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ccl9P51670 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ccl9P51670 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.72■□□□□ 0.27
Ccl9P51670 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccl9P51670 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ccl9P51670 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms