Protein–RNA interactions for Protein: O88174

Cd46, Membrane cofactor protein, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd46O88174 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd46O88174 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cd46O88174 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd46O88174 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd46O88174 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd46O88174 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cd46O88174 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cd46O88174 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.34■□□□□ 0.37
Cd46O88174 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd46O88174 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cd46O88174 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cd46O88174 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd46O88174 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.34■□□□□ 0.37
Cd46O88174 Gm37856-201ENSMUST00000191634 999 ntBASIC17.34■□□□□ 0.37
Cd46O88174 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.34■□□□□ 0.37
Cd46O88174 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd46O88174 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cd46O88174 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cd46O88174 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cd46O88174 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.33■□□□□ 0.36
Cd46O88174 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC17.33■□□□□ 0.36
Cd46O88174 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cd46O88174 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.33■□□□□ 0.36
Cd46O88174 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.33■□□□□ 0.36
Cd46O88174 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Cd46O88174 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd46O88174 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd46O88174 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd46O88174 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd46O88174 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd46O88174 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.32■□□□□ 0.36
Cd46O88174 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.32■□□□□ 0.36
Cd46O88174 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd46O88174 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd46O88174 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.32■□□□□ 0.36
Cd46O88174 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd46O88174 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.32■□□□□ 0.36
Cd46O88174 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd46O88174 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.32■□□□□ 0.36
Cd46O88174 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd46O88174 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cd46O88174 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.32■□□□□ 0.36
Cd46O88174 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd46O88174 AA386476-201ENSMUST00000098781 1665 ntBASIC17.32■□□□□ 0.36
Cd46O88174 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd46O88174 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cd46O88174 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
Cd46O88174 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd46O88174 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cd46O88174 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd46O88174 Gm26524-201ENSMUST00000192339 390 ntBASIC17.31■□□□□ 0.36
Cd46O88174 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd46O88174 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd46O88174 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd46O88174 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd46O88174 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cd46O88174 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.3■□□□□ 0.36
Cd46O88174 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd46O88174 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd46O88174 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Cd46O88174 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd46O88174 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd46O88174 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd46O88174 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cd46O88174 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd46O88174 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cd46O88174 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cd46O88174 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Cd46O88174 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd46O88174 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cd46O88174 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cd46O88174 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd46O88174 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd46O88174 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.29■□□□□ 0.36
Cd46O88174 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd46O88174 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd46O88174 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd46O88174 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd46O88174 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd46O88174 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cd46O88174 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.29■□□□□ 0.36
Cd46O88174 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd46O88174 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd46O88174 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Cd46O88174 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.28■□□□□ 0.36
Cd46O88174 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd46O88174 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.28■□□□□ 0.36
Cd46O88174 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.28■□□□□ 0.36
Cd46O88174 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cd46O88174 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd46O88174 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.28■□□□□ 0.36
Cd46O88174 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd46O88174 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Cd46O88174 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd46O88174 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd46O88174 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cd46O88174 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cd46O88174 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cd46O88174 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Cd46O88174 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms