Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hps1O08983 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hps1O08983 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hps1O08983 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Hps1O08983 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.71■□□□□ 0.42
Hps1O08983 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
Hps1O08983 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.71■□□□□ 0.42
Hps1O08983 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hps1O08983 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.7■□□□□ 0.42
Hps1O08983 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.7■□□□□ 0.42
Hps1O08983 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Hps1O08983 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hps1O08983 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.7■□□□□ 0.42
Hps1O08983 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hps1O08983 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hps1O08983 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Hps1O08983 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hps1O08983 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps1O08983 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps1O08983 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps1O08983 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hps1O08983 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.69■□□□□ 0.42
Hps1O08983 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps1O08983 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps1O08983 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hps1O08983 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Hps1O08983 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps1O08983 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.68■□□□□ 0.42
Hps1O08983 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.68■□□□□ 0.42
Hps1O08983 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps1O08983 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps1O08983 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps1O08983 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hps1O08983 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Hps1O08983 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hps1O08983 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Hps1O08983 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.67■□□□□ 0.42
Hps1O08983 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hps1O08983 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hps1O08983 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hps1O08983 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hps1O08983 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hps1O08983 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hps1O08983 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hps1O08983 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Hps1O08983 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hps1O08983 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hps1O08983 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hps1O08983 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Hps1O08983 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hps1O08983 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Hps1O08983 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hps1O08983 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.65■□□□□ 0.42
Hps1O08983 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hps1O08983 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hps1O08983 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.65■□□□□ 0.42
Hps1O08983 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hps1O08983 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hps1O08983 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.65■□□□□ 0.42
Hps1O08983 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.65■□□□□ 0.42
Hps1O08983 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.65■□□□□ 0.42
Hps1O08983 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hps1O08983 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hps1O08983 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.65■□□□□ 0.42
Hps1O08983 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hps1O08983 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Hps1O08983 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hps1O08983 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hps1O08983 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hps1O08983 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hps1O08983 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hps1O08983 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hps1O08983 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.64■□□□□ 0.42
Hps1O08983 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hps1O08983 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hps1O08983 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hps1O08983 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.64■□□□□ 0.41
Hps1O08983 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms