Protein–RNA interactions for Protein: B2RQC2

Usp42, Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

Known RBP Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42B2RQC2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.57■■□□□ 1.2
Usp42B2RQC2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Usp42B2RQC2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Usp42B2RQC2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp42B2RQC2 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp42B2RQC2 Gm7860-201ENSMUST00000121190 879 ntBASIC22.56■■□□□ 1.2
Usp42B2RQC2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.56■■□□□ 1.2
Usp42B2RQC2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Usp42B2RQC2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Usp42B2RQC2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
Usp42B2RQC2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp42B2RQC2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Usp42B2RQC2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
Usp42B2RQC2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.55■■□□□ 1.2
Usp42B2RQC2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Usp42B2RQC2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Usp42B2RQC2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Usp42B2RQC2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp42B2RQC2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp42B2RQC2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp42B2RQC2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Usp42B2RQC2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp42B2RQC2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Usp42B2RQC2 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.54■■□□□ 1.2
Usp42B2RQC2 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp42B2RQC2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp42B2RQC2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp42B2RQC2 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp42B2RQC2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Usp42B2RQC2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.53■■□□□ 1.2
Usp42B2RQC2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Usp42B2RQC2 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC22.53■■□□□ 1.2
Usp42B2RQC2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
Usp42B2RQC2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Usp42B2RQC2 Gm10493-201ENSMUST00000097270 612 ntBASIC22.53■■□□□ 1.2
Usp42B2RQC2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Usp42B2RQC2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Usp42B2RQC2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Usp42B2RQC2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Usp42B2RQC2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Usp42B2RQC2 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.52■■□□□ 1.2
Usp42B2RQC2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Usp42B2RQC2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp42B2RQC2 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp42B2RQC2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp42B2RQC2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Usp42B2RQC2 Gm38205-201ENSMUST00000192243 258 ntBASIC22.51■■□□□ 1.19
Usp42B2RQC2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Usp42B2RQC2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC22.49■■□□□ 1.19
Usp42B2RQC2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp42B2RQC2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp42B2RQC2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Usp42B2RQC2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp42B2RQC2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Usp42B2RQC2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Usp42B2RQC2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC22.49■■□□□ 1.19
Usp42B2RQC2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Usp42B2RQC2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Usp42B2RQC2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC22.48■■□□□ 1.19
Usp42B2RQC2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Usp42B2RQC2 Reep4-203ENSMUST00000226563 1444 ntBASIC22.48■■□□□ 1.19
Usp42B2RQC2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Usp42B2RQC2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.48■■□□□ 1.19
Usp42B2RQC2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC22.48■■□□□ 1.19
Usp42B2RQC2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC22.48■■□□□ 1.19
Usp42B2RQC2 Gm9988-201ENSMUST00000069786 435 ntBASIC22.48■■□□□ 1.19
Usp42B2RQC2 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Usp42B2RQC2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms