Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a4Q9QZR9 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.75■□□□□ 0.75
Col4a4Q9QZR9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a4Q9QZR9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col4a4Q9QZR9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Col4a4Q9QZR9 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.75■□□□□ 0.75
Col4a4Q9QZR9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.75■□□□□ 0.75
Col4a4Q9QZR9 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.75■□□□□ 0.75
Col4a4Q9QZR9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col4a4Q9QZR9 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a4Q9QZR9 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a4Q9QZR9 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.73■□□□□ 0.75
Col4a4Q9QZR9 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a4Q9QZR9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a4Q9QZR9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col4a4Q9QZR9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a4Q9QZR9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.72■□□□□ 0.75
Col4a4Q9QZR9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a4Q9QZR9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a4Q9QZR9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col4a4Q9QZR9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Col4a4Q9QZR9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Col4a4Q9QZR9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a4Q9QZR9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a4Q9QZR9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a4Q9QZR9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.7■□□□□ 0.74
Col4a4Q9QZR9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.7■□□□□ 0.74
Col4a4Q9QZR9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a4Q9QZR9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Col4a4Q9QZR9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Col4a4Q9QZR9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Gm15378-201ENSMUST00000121894 207 ntBASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Gm13158-201ENSMUST00000122007 736 ntBASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Col4a4Q9QZR9 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
Col4a4Q9QZR9 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.67■□□□□ 0.74
Col4a4Q9QZR9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Col4a4Q9QZR9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Col4a4Q9QZR9 Gm44549-201ENSMUST00000208351 577 ntBASIC19.67■□□□□ 0.74
Col4a4Q9QZR9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.67■□□□□ 0.74
Col4a4Q9QZR9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms