Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-4Q9EQM3 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-4Q9EQM3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-4Q9EQM3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Nkx2-4Q9EQM3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
Nkx2-4Q9EQM3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.92■□□□□ 0.78
Nkx2-4Q9EQM3 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-4Q9EQM3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Nkx2-4Q9EQM3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-4Q9EQM3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-4Q9EQM3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Nkx2-4Q9EQM3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-4Q9EQM3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-4Q9EQM3 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-4Q9EQM3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nkx2-4Q9EQM3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Gm37055-201ENSMUST00000191866 133 ntBASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nkx2-4Q9EQM3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 Gm11643-201ENSMUST00000119578 864 ntBASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 Gm7860-201ENSMUST00000121190 879 ntBASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 AA386476-201ENSMUST00000098781 1665 ntBASIC19.89■□□□□ 0.77
Nkx2-4Q9EQM3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Dio3-201ENSMUST00000097228 1449 ntBASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nkx2-4Q9EQM3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nkx2-4Q9EQM3 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-4Q9EQM3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-4Q9EQM3 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.86■□□□□ 0.77
Nkx2-4Q9EQM3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-4Q9EQM3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nkx2-4Q9EQM3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Gm10698-201ENSMUST00000182663 604 ntBASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Gm9987-201ENSMUST00000069768 567 ntBASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nkx2-4Q9EQM3 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nkx2-4Q9EQM3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms