Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.89■□□□□ 0.29
Scrt1Q99M85 Gm12527-201ENSMUST00000117967 564 ntBASIC16.89■□□□□ 0.29
Scrt1Q99M85 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.89■□□□□ 0.29
Scrt1Q99M85 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.89■□□□□ 0.29
Scrt1Q99M85 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Scrt1Q99M85 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scrt1Q99M85 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scrt1Q99M85 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Scrt1Q99M85 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scrt1Q99M85 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.88■□□□□ 0.29
Scrt1Q99M85 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scrt1Q99M85 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.87■□□□□ 0.29
Scrt1Q99M85 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC16.87■□□□□ 0.29
Scrt1Q99M85 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scrt1Q99M85 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scrt1Q99M85 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scrt1Q99M85 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scrt1Q99M85 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.87■□□□□ 0.29
Scrt1Q99M85 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Scrt1Q99M85 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Scrt1Q99M85 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Scrt1Q99M85 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scrt1Q99M85 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scrt1Q99M85 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Scrt1Q99M85 Mir7071-201ENSMUST00000184847 69 ntBASIC16.86■□□□□ 0.29
Scrt1Q99M85 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scrt1Q99M85 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Scrt1Q99M85 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.86■□□□□ 0.29
Scrt1Q99M85 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Scrt1Q99M85 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Scrt1Q99M85 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scrt1Q99M85 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Scrt1Q99M85 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Scrt1Q99M85 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 Gm20760-201ENSMUST00000179197 648 ntBASIC16.84■□□□□ 0.29
Scrt1Q99M85 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.84■□□□□ 0.29
Scrt1Q99M85 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.84■□□□□ 0.29
Scrt1Q99M85 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.84■□□□□ 0.29
Scrt1Q99M85 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Scrt1Q99M85 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Scrt1Q99M85 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Scrt1Q99M85 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.83■□□□□ 0.28
Scrt1Q99M85 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.83■□□□□ 0.28
Scrt1Q99M85 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scrt1Q99M85 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Scrt1Q99M85 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scrt1Q99M85 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scrt1Q99M85 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Scrt1Q99M85 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Scrt1Q99M85 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Gm27801-201ENSMUST00000184174 223 ntBASIC16.82■□□□□ 0.28
Scrt1Q99M85 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Scrt1Q99M85 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scrt1Q99M85 Gm22325-201ENSMUST00000158904 308 ntBASIC16.81■□□□□ 0.28
Scrt1Q99M85 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
Scrt1Q99M85 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Scrt1Q99M85 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Scrt1Q99M85 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms