Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Col20a1Q923P0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col20a1Q923P0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
Col20a1Q923P0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.87■■□□□ 1.25
Col20a1Q923P0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Col20a1Q923P0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC22.87■■□□□ 1.25
Col20a1Q923P0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Col20a1Q923P0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col20a1Q923P0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
Col20a1Q923P0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col20a1Q923P0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col20a1Q923P0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Col20a1Q923P0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
Col20a1Q923P0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col20a1Q923P0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC22.85■■□□□ 1.25
Col20a1Q923P0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Col20a1Q923P0 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.85■■□□□ 1.25
Col20a1Q923P0 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col20a1Q923P0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.84■■□□□ 1.25
Col20a1Q923P0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC22.84■■□□□ 1.25
Col20a1Q923P0 Spcs1-207ENSMUST00000228767 1008 ntBASIC22.84■■□□□ 1.25
Col20a1Q923P0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col20a1Q923P0 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col20a1Q923P0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col20a1Q923P0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Col20a1Q923P0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Col20a1Q923P0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.83■■□□□ 1.25
Col20a1Q923P0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col20a1Q923P0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col20a1Q923P0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col20a1Q923P0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Col20a1Q923P0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
Col20a1Q923P0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col20a1Q923P0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Col20a1Q923P0 Mir5133-201ENSMUST00000174955 77 ntBASIC22.82■■□□□ 1.24
Col20a1Q923P0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Col20a1Q923P0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Col20a1Q923P0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col20a1Q923P0 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col20a1Q923P0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col20a1Q923P0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Col20a1Q923P0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Col20a1Q923P0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Col20a1Q923P0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Col20a1Q923P0 Gm6420-201ENSMUST00000193885 723 ntBASIC22.8■■□□□ 1.24
Col20a1Q923P0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC22.8■■□□□ 1.24
Col20a1Q923P0 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.79■■□□□ 1.24
Col20a1Q923P0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Col20a1Q923P0 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.79■■□□□ 1.24
Col20a1Q923P0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Gm7290-201ENSMUST00000104990 617 ntBASIC22.78■■□□□ 1.24
Col20a1Q923P0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Gm12918-201ENSMUST00000120234 636 ntBASIC22.78■■□□□ 1.24
Col20a1Q923P0 Gm15710-201ENSMUST00000121821 636 ntBASIC22.78■■□□□ 1.24
Col20a1Q923P0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Col20a1Q923P0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC22.78■■□□□ 1.24
Col20a1Q923P0 Gm5075-201ENSMUST00000196916 622 ntBASIC22.78■■□□□ 1.24
Col20a1Q923P0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC22.78■■□□□ 1.24
Col20a1Q923P0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC22.78■■□□□ 1.24
Col20a1Q923P0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Col20a1Q923P0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.77■■□□□ 1.24
Col20a1Q923P0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col20a1Q923P0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Col20a1Q923P0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col20a1Q923P0 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col20a1Q923P0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Col20a1Q923P0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Col20a1Q923P0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms