Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
Pcdhb2Q91Y00 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhb2Q91Y00 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Pcdhb2Q91Y00 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb2Q91Y00 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.48■□□□□ 0.87
Pcdhb2Q91Y00 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Pcdhb2Q91Y00 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb2Q91Y00 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb2Q91Y00 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pcdhb2Q91Y00 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.48■□□□□ 0.87
Pcdhb2Q91Y00 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb2Q91Y00 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb2Q91Y00 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.47■□□□□ 0.87
Pcdhb2Q91Y00 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb2Q91Y00 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb2Q91Y00 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pcdhb2Q91Y00 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb2Q91Y00 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb2Q91Y00 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb2Q91Y00 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pcdhb2Q91Y00 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdhb2Q91Y00 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdhb2Q91Y00 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb2Q91Y00 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb2Q91Y00 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb2Q91Y00 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb2Q91Y00 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdhb2Q91Y00 Gm42642-201ENSMUST00000200683 355 ntBASIC20.44■□□□□ 0.86
Pcdhb2Q91Y00 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb2Q91Y00 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb2Q91Y00 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdhb2Q91Y00 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdhb2Q91Y00 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdhb2Q91Y00 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Gm18671-201ENSMUST00000214826 683 ntBASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdhb2Q91Y00 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms