Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
Ddx41Q91VN6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx41Q91VN6 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx41Q91VN6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx41Q91VN6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.05■■□□□ 1.12
Ddx41Q91VN6 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ddx41Q91VN6 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC22.05■■□□□ 1.12
Ddx41Q91VN6 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC22.05■■□□□ 1.12
Ddx41Q91VN6 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Ddx41Q91VN6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx41Q91VN6 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx41Q91VN6 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx41Q91VN6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Ddx41Q91VN6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.05■■□□□ 1.12
Ddx41Q91VN6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Gm18671-201ENSMUST00000214826 683 ntBASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.04■■□□□ 1.12
Ddx41Q91VN6 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.03■■□□□ 1.12
Ddx41Q91VN6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx41Q91VN6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx41Q91VN6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ddx41Q91VN6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx41Q91VN6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx41Q91VN6 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Ddx41Q91VN6 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx41Q91VN6 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx41Q91VN6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx41Q91VN6 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC22.02■■□□□ 1.12
Ddx41Q91VN6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx41Q91VN6 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
Ddx41Q91VN6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Ddx41Q91VN6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC22.02■■□□□ 1.11
Ddx41Q91VN6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Gm37179-201ENSMUST00000194862 823 ntBASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Gm42778-201ENSMUST00000199644 553 ntBASIC22.01■■□□□ 1.11
Ddx41Q91VN6 AV356131-201ENSMUST00000206201 750 ntBASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Ddx41Q91VN6 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC22■■□□□ 1.11
Ddx41Q91VN6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx41Q91VN6 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx41Q91VN6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx41Q91VN6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx41Q91VN6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx41Q91VN6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx41Q91VN6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ddx41Q91VN6 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ddx41Q91VN6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC22■■□□□ 1.11
Ddx41Q91VN6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx41Q91VN6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx41Q91VN6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx41Q91VN6 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx41Q91VN6 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.99■■□□□ 1.11
Ddx41Q91VN6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
Ddx41Q91VN6 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx41Q91VN6 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx41Q91VN6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ddx41Q91VN6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ddx41Q91VN6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx41Q91VN6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx41Q91VN6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx41Q91VN6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ddx41Q91VN6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
Ddx41Q91VN6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms